Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HFM1A2PYH4 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
HFM1A2PYH4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
HFM1A2PYH4 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 TANK-203ENST00000402568 878 ntTSL 5 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 KRTAP2-5P-201ENST00000446109 396 ntBASIC9.22□□□□□ -0.93
HFM1A2PYH4 AC103563.5-201ENST00000455643 364 ntBASIC9.22□□□□□ -0.93
HFM1A2PYH4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 AC025458.1-201ENST00000506046 166 ntBASIC9.22□□□□□ -0.93
HFM1A2PYH4 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 RNA5SP340-201ENST00000517132 107 ntBASIC9.22□□□□□ -0.93
HFM1A2PYH4 RNA5SP400-201ENST00000517155 111 ntBASIC9.22□□□□□ -0.93
HFM1A2PYH4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 OR4H6P-201ENST00000563771 921 ntBASIC9.22□□□□□ -0.93
HFM1A2PYH4 AC011497.2-201ENST00000600255 639 ntBASIC9.22□□□□□ -0.93
HFM1A2PYH4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC9.22□□□□□ -0.93
HFM1A2PYH4 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
HFM1A2PYH4 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
HFM1A2PYH4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HFM1A2PYH4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
HFM1A2PYH4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC9.21□□□□□ -0.93
HFM1A2PYH4 HSPD1P9-201ENST00000420325 1636 ntBASIC9.21□□□□□ -0.93
HFM1A2PYH4 TMEM75-201ENST00000624314 2165 ntBASIC9.21□□□□□ -0.94
HFM1A2PYH4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
HFM1A2PYH4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
HFM1A2PYH4 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC9.21□□□□□ -0.94
HFM1A2PYH4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
HFM1A2PYH4 RBMY1HP-201ENST00000382759 1389 ntBASIC9.21□□□□□ -0.94
HFM1A2PYH4 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
HFM1A2PYH4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
HFM1A2PYH4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
HFM1A2PYH4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC9.21□□□□□ -0.94
HFM1A2PYH4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC9.21□□□□□ -0.94
HFM1A2PYH4 SEPHS1P4-201ENST00000446112 1176 ntBASIC9.21□□□□□ -0.94
HFM1A2PYH4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
HFM1A2PYH4 SETP20-201ENST00000457046 852 ntBASIC9.21□□□□□ -0.94
HFM1A2PYH4 RPL7P51-201ENST00000490532 749 ntBASIC9.21□□□□□ -0.94
HFM1A2PYH4 AC060775.1-201ENST00000518241 520 ntBASIC9.21□□□□□ -0.94
HFM1A2PYH4 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC9.21□□□□□ -0.94
HFM1A2PYH4 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC9.21□□□□□ -0.94
HFM1A2PYH4 MIR4301-201ENST00000577203 66 ntBASIC9.21□□□□□ -0.94
HFM1A2PYH4 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC9.21□□□□□ -0.94
HFM1A2PYH4 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC9.21□□□□□ -0.94
HFM1A2PYH4 RFPL4AP6-201ENST00000616792 846 ntBASIC9.21□□□□□ -0.94
HFM1A2PYH4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC9.21□□□□□ -0.94
HFM1A2PYH4 AC003992.1-201ENST00000635364 557 ntBASIC9.21□□□□□ -0.94
HFM1A2PYH4 MIR4302-201ENST00000638058 60 ntBASIC9.21□□□□□ -0.94
HFM1A2PYH4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
HFM1A2PYH4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC9.21□□□□□ -0.94
HFM1A2PYH4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HFM1A2PYH4 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
HFM1A2PYH4 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
HFM1A2PYH4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HFM1A2PYH4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HFM1A2PYH4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HFM1A2PYH4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HFM1A2PYH4 HMGN1P20-201ENST00000411849 300 ntBASIC9.2□□□□□ -0.94
HFM1A2PYH4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 RPL7AP14-201ENST00000424041 802 ntBASIC9.2□□□□□ -0.94
HFM1A2PYH4 AL359839.1-201ENST00000451975 1160 ntBASIC9.2□□□□□ -0.94
HFM1A2PYH4 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 AC011411.1-201ENST00000509592 876 ntBASIC9.2□□□□□ -0.94
HFM1A2PYH4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HFM1A2PYH4 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 AC091193.1-201ENST00000604640 448 ntBASIC9.2□□□□□ -0.94
HFM1A2PYH4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 MIR6809-201ENST00000612189 116 ntBASIC9.2□□□□□ -0.94
HFM1A2PYH4 AC026124.2-201ENST00000621847 656 ntBASIC9.2□□□□□ -0.94
HFM1A2PYH4 AC073488.3-201ENST00000631611 778 ntBASIC9.2□□□□□ -0.94
HFM1A2PYH4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HFM1A2PYH4 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HFM1A2PYH4 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
HFM1A2PYH4 EEF1A1P21-201ENST00000512363 1344 ntBASIC9.2□□□□□ -0.94
HFM1A2PYH4 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HFM1A2PYH4 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
HFM1A2PYH4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
HFM1A2PYH4 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC9.19□□□□□ -0.94
HFM1A2PYH4 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
HFM1A2PYH4 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms