Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC068769.1-201ENST00000474767 2426 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TCRBV7S3A2A0A539 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
TCRBV7S3A2A0A539 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TCRBV7S3A2A0A539 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
TCRBV7S3A2A0A539 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TCRBV7S3A2A0A539 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.46□□□□□ -1.37
TCRBV7S3A2A0A539 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TCRBV7S3A2A0A539 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
TCRBV7S3A2A0A539 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 OR2AH1P-202ENST00000641232 2744 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC026310.1-201ENST00000396004 378 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 DHFRP5-201ENST00000406944 564 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AL117344.1-201ENST00000407196 616 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 ELOBP4-201ENST00000423418 296 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AL157884.1-201ENST00000424561 454 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC009567.2-201ENST00000502989 349 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC073648.3-201ENST00000504939 925 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC018645.1-201ENST00000505003 109 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC106800.3-201ENST00000511389 308 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 HNRNPRP2-201ENST00000528421 743 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC089984.3-201ENST00000552838 363 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC004023.1-201ENST00000561473 1744 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AL512430.4-201ENST00000603085 613 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC092944.2-201ENST00000605443 889 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AL008582.1-201ENST00000609612 442 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AP003789.1-201ENST00000617737 605 ntBASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TCRBV7S3A2A0A539 AC079248.1-201ENST00000427568 1546 ntBASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AC092692.1-201ENST00000623625 2595 ntBASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AP001541.1-201ENST00000623322 1904 ntBASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AC019178.1-201ENST00000392337 440 ntBASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 VN1R53P-201ENST00000429536 957 ntBASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 GTF2IP14-201ENST00000441415 586 ntBASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 MARK2P8-201ENST00000476069 952 ntBASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 RNU6-467P-201ENST00000517027 110 ntBASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.45□□□□□ -1.38
TCRBV7S3A2A0A539 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms