Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 SEPT7P7-201ENST00000420492 1301 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 RNU6-386P-201ENST00000362650 107 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 RN7SKP69-201ENST00000365390 305 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 LCN1P2-201ENST00000372030 223 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 MTCO2P8-201ENST00000412213 658 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 SNRPBP1-201ENST00000443634 282 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AC096922.1-201ENST00000461635 651 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 RPEP1-201ENST00000504507 658 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 SNORA74.1-201ENST00000516320 180 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 VTA1P2-201ENST00000520205 911 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AC090888.2-201ENST00000559765 1144 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AC096708.2-201ENST00000577676 512 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AC067773.1-201ENST00000603284 1094 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AL450270.1-201ENST00000606160 391 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AL096712.1-201ENST00000614561 159 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AC073342.3-201ENST00000624211 193 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 KARSP1-201ENST00000451871 1752 ntBASIC6.86□□□□□ -1.31
NCDNQ9UBB6 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.86□□□□□ -1.31
NCDNQ9UBB6 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 RNA5SP140-201ENST00000364524 92 ntBASIC6.85□□□□□ -1.31
NCDNQ9UBB6 SNORA27.3-201ENST00000364937 134 ntBASIC6.85□□□□□ -1.31
NCDNQ9UBB6 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 PCNPP4-201ENST00000414817 517 ntBASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AJ239321.1-201ENST00000424255 564 ntBASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AL512637.2-201ENST00000431287 1256 ntBASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AC092106.2-201ENST00000436597 487 ntBASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 MTND1P31-201ENST00000449206 961 ntBASIC6.85□□□□□ -1.31
NCDNQ9UBB6 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 RN7SL39P-201ENST00000462264 297 ntBASIC6.85□□□□□ -1.31
NCDNQ9UBB6 MTCO2P6-201ENST00000463134 685 ntBASIC6.85□□□□□ -1.31
NCDNQ9UBB6 RN7SL101P-201ENST00000496350 279 ntBASIC6.85□□□□□ -1.31
NCDNQ9UBB6 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 RNU6-1102P-201ENST00000516149 96 ntBASIC6.85□□□□□ -1.31
NCDNQ9UBB6 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 RPL10P18-201ENST00000519384 309 ntBASIC6.85□□□□□ -1.31
NCDNQ9UBB6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.85□□□□□ -1.31
NCDNQ9UBB6 AC093510.2-201ENST00000562820 896 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms