Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CYCSP1-201ENST00000604815 315 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AL021368.3-201ENST00000607119 578 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AC010480.1-201ENST00000624823 684 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 AP001052.1-201ENST00000626421 99 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 MAPK10-270ENST00000641102 3538 ntBASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
KIAA1549Q9HCM3 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AL391261.1-201ENST00000555712 1479 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 OR52I1-201ENST00000450052 1050 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 RN7SL714P-201ENST00000487050 298 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 MIR3614-201ENST00000581261 86 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC067852.5-201ENST00000589299 310 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC068768.2-201ENST00000602352 343 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC073333.2-201ENST00000603589 769 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AL008723.3-201ENST00000608926 449 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC004801.6-201ENST00000616571 978 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 MIR6861-201ENST00000618657 64 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AL137067.2-201ENST00000621202 131 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC022034.1-201ENST00000512867 2156 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 UG0898H09-202ENST00000623646 7040 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 RPL21P50-201ENST00000417698 477 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC097721.1-201ENST00000427150 1253 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC069154.1-201ENST00000432914 542 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 GAPDHP23-201ENST00000444823 993 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 RN7SL104P-201ENST00000498686 293 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 RNA5SP206-201ENST00000516703 121 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 AL512652.1-201ENST00000619006 500 ntBASIC5.66□□□□□ -1.5
KIAA1549Q9HCM3 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 AC005831.1-201ENST00000624384 1697 ntBASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
KIAA1549Q9HCM3 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 RNA5SP273-201ENST00000362484 113 ntBASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 SNORA43.1-201ENST00000364863 140 ntBASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KIAA1549Q9HCM3 RN7SL643P-201ENST00000471845 291 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms