Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RPAP1Q9BWH6 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RPAP1Q9BWH6 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RPAP1Q9BWH6 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RPAP1Q9BWH6 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RPAP1Q9BWH6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
RPAP1Q9BWH6 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 RN7SKP108-201ENST00000411367 328 ntBASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 AC097721.1-201ENST00000427150 1253 ntBASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 MED28P4-201ENST00000433137 572 ntBASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 OR52I1-201ENST00000450052 1050 ntBASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 AC018638.3-201ENST00000461273 132 ntBASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 MIR6085-201ENST00000618314 110 ntBASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 AC104966.1-201ENST00000467010 1464 ntBASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 VN2R1P-201ENST00000449668 1743 ntBASIC7.77□□□□□ -1.17
RPAP1Q9BWH6 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 AC005522.1-201ENST00000395416 346 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 AL050335.1-201ENST00000396909 869 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 GCNT1P4-201ENST00000404096 329 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 SNORA77.2-201ENST00000408571 112 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 RPS29P14-201ENST00000431518 171 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 EMC3-AS1-205ENST00000438698 534 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 OR2AF1P-201ENST00000454899 889 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 AC091193.1-201ENST00000604640 448 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 AC108865.2-201ENST00000606881 432 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 MIR6862-1-201ENST00000613016 70 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 MIR6862-2-201ENST00000614755 70 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 MRPL57P1-201ENST00000621486 265 ntBASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.76□□□□□ -1.17
RPAP1Q9BWH6 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 RNA5SP435-201ENST00000364044 108 ntBASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 PNKDP1-201ENST00000435914 430 ntBASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 DNAJA1P5-201ENST00000440278 943 ntBASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 HMGB1P7-201ENST00000450921 612 ntBASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 SNX18P25-201ENST00000510539 758 ntBASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 AC108103.1-201ENST00000511286 446 ntBASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 AC023968.1-201ENST00000560719 475 ntBASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 LINC02495-203ENST00000636704 242 ntBASIC7.75□□□□□ -1.17
RPAP1Q9BWH6 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms