Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC090912.3-201ENST00000609775 533 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 OR1N1-202ENST00000619659 939 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC117503.3-201ENST00000623811 601 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 NCOA4P2-201ENST00000340589 1813 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 PARP4P1-201ENST00000435945 2337 ntBASIC6.2□□□□□ -1.42
SNX18Q96RF0 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SNX18Q96RF0 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX18Q96RF0 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 RNU4-81P-201ENST00000363561 144 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 AC096537.2-201ENST00000413707 714 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 VN1R37P-201ENST00000419096 748 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 MTCO2P17-201ENST00000424336 677 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 AC073508.1-201ENST00000428866 656 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 AL606517.1-201ENST00000446914 387 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 OR9N1P-201ENST00000491296 333 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 AC093801.2-201ENST00000503966 1050 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 AC021820.1-201ENST00000525564 808 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 RN7SL126P-201ENST00000616400 299 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 AP006248.3-201ENST00000623580 594 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 AC087894.3-201ENST00000623682 349 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 AC005355.2-201ENST00000625064 484 ntBASIC6.19□□□□□ -1.42
SNX18Q96RF0 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX18Q96RF0 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.19□□□□□ -1.42
SNX18Q96RF0 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX18Q96RF0 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.18□□□□□ -1.42
SNX18Q96RF0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SNX18Q96RF0 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX18Q96RF0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX18Q96RF0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX18Q96RF0 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX18Q96RF0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX18Q96RF0 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.18□□□□□ -1.42
SNX18Q96RF0 AP005139.1-201ENST00000580702 1647 ntBASIC6.18□□□□□ -1.42
SNX18Q96RF0 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SNX18Q96RF0 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SNX18Q96RF0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX18Q96RF0 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX18Q96RF0 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX18Q96RF0 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX18Q96RF0 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX18Q96RF0 RPL24P4-201ENST00000326586 421 ntBASIC6.18□□□□□ -1.42
SNX18Q96RF0 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX18Q96RF0 CCNB2P1-201ENST00000399411 1150 ntBASIC6.18□□□□□ -1.42
SNX18Q96RF0 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX18Q96RF0 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms