Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
NEK3P51956 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.95□□□□□ -1.3
NEK3P51956 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEK3P51956 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.95□□□□□ -1.3
NEK3P51956 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.95□□□□□ -1.3
NEK3P51956 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.94□□□□□ -1.3
NEK3P51956 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.94□□□□□ -1.3
NEK3P51956 DLEU2L-201ENST00000371086 3555 ntBASIC6.94□□□□□ -1.3
NEK3P51956 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.94□□□□□ -1.3
NEK3P51956 AL669831.5-218ENST00000591702 1873 ntBASIC6.94□□□□□ -1.3
NEK3P51956 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
NEK3P51956 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
NEK3P51956 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
NEK3P51956 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
NEK3P51956 RPL24P4-201ENST00000326586 421 ntBASIC6.94□□□□□ -1.3
NEK3P51956 RNA5SP382-201ENST00000363355 112 ntBASIC6.94□□□□□ -1.3
NEK3P51956 RN7SKP130-201ENST00000364924 301 ntBASIC6.94□□□□□ -1.3
NEK3P51956 AC092634.1-201ENST00000366505 199 ntBASIC6.94□□□□□ -1.3
NEK3P51956 PPIAP26-201ENST00000377951 522 ntBASIC6.94□□□□□ -1.3
NEK3P51956 MIR551B-201ENST00000384984 96 ntBASIC6.94□□□□□ -1.3
NEK3P51956 SNORD65-201ENST00000391079 73 ntBASIC6.94□□□□□ -1.3
NEK3P51956 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
NEK3P51956 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.94□□□□□ -1.3
NEK3P51956 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 RN7SKP205-201ENST00000410999 307 ntBASIC6.94□□□□□ -1.3
NEK3P51956 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.94□□□□□ -1.3
NEK3P51956 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.94□□□□□ -1.3
NEK3P51956 AHCYP8-201ENST00000425108 209 ntBASIC6.94□□□□□ -1.3
NEK3P51956 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.94□□□□□ -1.3
NEK3P51956 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.94□□□□□ -1.3
NEK3P51956 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 RPL7AP71-201ENST00000451120 739 ntBASIC6.94□□□□□ -1.3
NEK3P51956 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.94□□□□□ -1.3
NEK3P51956 NMNAT1P3-201ENST00000457517 888 ntBASIC6.94□□□□□ -1.3
NEK3P51956 RN7SKP198-201ENST00000459286 306 ntBASIC6.94□□□□□ -1.3
NEK3P51956 EIF2S2P4-201ENST00000461070 984 ntBASIC6.94□□□□□ -1.3
NEK3P51956 RN7SL654P-201ENST00000479178 292 ntBASIC6.94□□□□□ -1.3
NEK3P51956 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.94□□□□□ -1.3
NEK3P51956 FTH1P8-201ENST00000498161 514 ntBASIC6.94□□□□□ -1.3
NEK3P51956 MTND6P8-201ENST00000503471 522 ntBASIC6.94□□□□□ -1.3
NEK3P51956 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.94□□□□□ -1.3
NEK3P51956 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.94□□□□□ -1.3
NEK3P51956 MRPL57P6-201ENST00000506570 309 ntBASIC6.94□□□□□ -1.3
NEK3P51956 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.94□□□□□ -1.3
NEK3P51956 AC093878.1-201ENST00000515630 432 ntBASIC6.94□□□□□ -1.3
NEK3P51956 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.94□□□□□ -1.3
NEK3P51956 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.94□□□□□ -1.3
NEK3P51956 AP001804.2-201ENST00000533932 910 ntBASIC6.94□□□□□ -1.3
NEK3P51956 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 AC018558.5-201ENST00000565840 952 ntBASIC6.94□□□□□ -1.3
NEK3P51956 RPS4XP21-201ENST00000603814 750 ntBASIC6.94□□□□□ -1.3
NEK3P51956 AC007423.1-201ENST00000605009 627 ntBASIC6.94□□□□□ -1.3
NEK3P51956 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 AC025287.2-201ENST00000621911 668 ntBASIC6.94□□□□□ -1.3
NEK3P51956 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
NEK3P51956 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.94□□□□□ -1.3
NEK3P51956 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.94□□□□□ -1.3
NEK3P51956 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.94□□□□□ -1.3
NEK3P51956 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
NEK3P51956 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.94□□□□□ -1.3
NEK3P51956 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.94□□□□□ -1.3
NEK3P51956 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.94□□□□□ -1.3
NEK3P51956 AL136531.3-201ENST00000624378 3658 ntBASIC6.94□□□□□ -1.3
NEK3P51956 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEK3P51956 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.94□□□□□ -1.3
NEK3P51956 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 AP000547.3-204ENST00000588548 2523 ntBASIC6.93□□□□□ -1.3
NEK3P51956 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.93□□□□□ -1.3
NEK3P51956 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NEK3P51956 OR6K3-202ENST00000368146 996 ntBASIC6.93□□□□□ -1.3
NEK3P51956 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEK3P51956 AL034417.1-201ENST00000399343 800 ntBASIC6.93□□□□□ -1.3
NEK3P51956 UBE2V1P15-201ENST00000407776 448 ntBASIC6.93□□□□□ -1.3
NEK3P51956 MIR1266-201ENST00000408125 84 ntBASIC6.93□□□□□ -1.3
NEK3P51956 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.93□□□□□ -1.3
NEK3P51956 AL606490.7-201ENST00000433136 191 ntBASIC6.93□□□□□ -1.3
NEK3P51956 PA2G4P1-201ENST00000442248 1197 ntBASIC6.93□□□□□ -1.3
NEK3P51956 AL356121.1-201ENST00000442911 156 ntBASIC6.93□□□□□ -1.3
NEK3P51956 RPL5P33-201ENST00000487833 905 ntBASIC6.93□□□□□ -1.3
NEK3P51956 RWDD4P1-201ENST00000488019 565 ntBASIC6.93□□□□□ -1.3
NEK3P51956 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.93□□□□□ -1.3
NEK3P51956 AC009567.2-201ENST00000502989 349 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms