Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNA5SP514-201ENST00000363717 111 ntBASIC7.37□□□□□ -1.23
COL4A5P29400 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.37□□□□□ -1.23
COL4A5P29400 AL662874.1-201ENST00000426065 230 ntBASIC7.37□□□□□ -1.23
COL4A5P29400 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.37□□□□□ -1.23
COL4A5P29400 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.37□□□□□ -1.23
COL4A5P29400 AC092967.1-201ENST00000449016 481 ntBASIC7.37□□□□□ -1.23
COL4A5P29400 AC006499.3-201ENST00000506077 748 ntBASIC7.37□□□□□ -1.23
COL4A5P29400 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.37□□□□□ -1.23
COL4A5P29400 AC044860.2-201ENST00000561005 179 ntBASIC7.37□□□□□ -1.23
COL4A5P29400 AC022919.1-201ENST00000624979 626 ntBASIC7.37□□□□□ -1.23
COL4A5P29400 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.37□□□□□ -1.23
COL4A5P29400 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
COL4A5P29400 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
COL4A5P29400 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.36□□□□□ -1.23
COL4A5P29400 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.36□□□□□ -1.23
COL4A5P29400 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.36□□□□□ -1.23
COL4A5P29400 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 BIN2P1-201ENST00000504996 1530 ntBASIC7.36□□□□□ -1.23
COL4A5P29400 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.36□□□□□ -1.23
COL4A5P29400 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.36□□□□□ -1.23
COL4A5P29400 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
COL4A5P29400 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.36□□□□□ -1.23
COL4A5P29400 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.36□□□□□ -1.23
COL4A5P29400 RN7SL72P-201ENST00000460697 269 ntBASIC7.36□□□□□ -1.23
COL4A5P29400 SNORA58-201ENST00000505219 137 ntBASIC7.36□□□□□ -1.23
COL4A5P29400 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.36□□□□□ -1.23
COL4A5P29400 OR7A11P-201ENST00000597719 953 ntBASIC7.36□□□□□ -1.23
COL4A5P29400 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.36□□□□□ -1.23
COL4A5P29400 RN7SL544P-201ENST00000617232 284 ntBASIC7.36□□□□□ -1.23
COL4A5P29400 RN7SL763P-201ENST00000620922 284 ntBASIC7.36□□□□□ -1.23
COL4A5P29400 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.36□□□□□ -1.23
COL4A5P29400 TSHZ2-205ENST00000626626 670 ntBASIC7.36□□□□□ -1.23
COL4A5P29400 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.36□□□□□ -1.23
COL4A5P29400 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
COL4A5P29400 AL590763.1-201ENST00000398297 1545 ntBASIC7.36□□□□□ -1.23
COL4A5P29400 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.36□□□□□ -1.23
COL4A5P29400 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.36□□□□□ -1.23
COL4A5P29400 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A5P29400 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.35□□□□□ -1.23
COL4A5P29400 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.35□□□□□ -1.23
COL4A5P29400 OTX2P1-201ENST00000450956 354 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 AL133445.1-201ENST00000467051 452 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 AC108693.1-201ENST00000496068 432 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.35□□□□□ -1.23
COL4A5P29400 AC010343.2-201ENST00000510162 224 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.35□□□□□ -1.23
COL4A5P29400 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.35□□□□□ -1.23
COL4A5P29400 RPA2P3-201ENST00000533268 770 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.35□□□□□ -1.23
COL4A5P29400 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.35□□□□□ -1.23
COL4A5P29400 AL390726.5-202ENST00000564800 256 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 RNU4ATAC-201ENST00000580972 127 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 FO393422.1-201ENST00000603908 708 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.35□□□□□ -1.23
COL4A5P29400 CU639417.4-201ENST00000623928 207 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
COL4A5P29400 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.35□□□□□ -1.23
COL4A5P29400 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC7.35□□□□□ -1.23
COL4A5P29400 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 AC010478.1-201ENST00000601500 6762 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.35□□□□□ -1.23
COL4A5P29400 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
COL4A5P29400 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.35□□□□□ -1.23
COL4A5P29400 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.35□□□□□ -1.23
COL4A5P29400 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 AL050335.1-201ENST00000396909 869 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 RN7SKP216-201ENST00000411050 312 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 NDUFA5P12-201ENST00000503796 343 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 AC004808.2-201ENST00000627965 773 ntBASIC7.35□□□□□ -1.23
COL4A5P29400 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A5P29400 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.34□□□□□ -1.23
COL4A5P29400 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.34□□□□□ -1.23
COL4A5P29400 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
COL4A5P29400 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A5P29400 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms