Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
CD40P25942 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC6.28□□□□□ -1.4
CD40P25942 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.28□□□□□ -1.4
CD40P25942 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
CD40P25942 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.28□□□□□ -1.4
CD40P25942 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 SNORD65C-201ENST00000390962 71 ntBASIC6.28□□□□□ -1.4
CD40P25942 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 ZNF37CP-201ENST00000406795 241 ntBASIC6.28□□□□□ -1.4
CD40P25942 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.28□□□□□ -1.4
CD40P25942 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 MICG-208ENST00000416822 132 ntBASIC6.28□□□□□ -1.4
CD40P25942 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 AC009518.2-201ENST00000418056 731 ntBASIC6.28□□□□□ -1.4
CD40P25942 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 AC246680.2-201ENST00000422106 389 ntBASIC6.28□□□□□ -1.4
CD40P25942 AL139415.1-201ENST00000424862 352 ntBASIC6.28□□□□□ -1.4
CD40P25942 AC134879.1-201ENST00000426062 394 ntBASIC6.28□□□□□ -1.4
CD40P25942 HSPE1P16-201ENST00000426640 348 ntBASIC6.28□□□□□ -1.4
CD40P25942 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 DNAJA1P6-201ENST00000437347 354 ntBASIC6.28□□□□□ -1.4
CD40P25942 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 RPL7L1P11-201ENST00000446092 721 ntBASIC6.28□□□□□ -1.4
CD40P25942 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 PTENP1-201ENST00000447117 1215 ntBASIC6.28□□□□□ -1.4
CD40P25942 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 MYL6P4-201ENST00000477911 453 ntBASIC6.28□□□□□ -1.4
CD40P25942 RN7SL775P-201ENST00000498361 336 ntBASIC6.28□□□□□ -1.4
CD40P25942 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 NACAP6-201ENST00000509572 622 ntBASIC6.28□□□□□ -1.4
CD40P25942 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 AP005597.2-201ENST00000526238 341 ntBASIC6.28□□□□□ -1.4
CD40P25942 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.28□□□□□ -1.4
CD40P25942 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 RBM22P12-201ENST00000567098 1255 ntBASIC6.28□□□□□ -1.4
CD40P25942 MIR4470-201ENST00000583453 72 ntBASIC6.28□□□□□ -1.4
CD40P25942 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 AC010503.3-201ENST00000594355 540 ntBASIC6.28□□□□□ -1.4
CD40P25942 AC146944.4-201ENST00000602697 718 ntBASIC6.28□□□□□ -1.4
CD40P25942 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.28□□□□□ -1.4
CD40P25942 AL031777.2-201ENST00000611953 196 ntBASIC6.28□□□□□ -1.4
CD40P25942 MIR8082-201ENST00000612488 81 ntBASIC6.28□□□□□ -1.4
CD40P25942 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.28□□□□□ -1.4
CD40P25942 MIR6883-201ENST00000614952 78 ntBASIC6.28□□□□□ -1.4
CD40P25942 AC011815.3-201ENST00000624194 473 ntBASIC6.28□□□□□ -1.4
CD40P25942 AC139792.2-201ENST00000624218 587 ntBASIC6.28□□□□□ -1.4
CD40P25942 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.28□□□□□ -1.4
CD40P25942 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 SPATA2P1-201ENST00000431223 2055 ntBASIC6.28□□□□□ -1.4
CD40P25942 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 API5P1-201ENST00000424316 1510 ntBASIC6.28□□□□□ -1.4
CD40P25942 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
CD40P25942 AL133320.1-201ENST00000621423 2352 ntBASIC6.28□□□□□ -1.4
CD40P25942 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CD40P25942 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CD40P25942 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC6.27□□□□□ -1.4
CD40P25942 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.4
CD40P25942 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.27□□□□□ -1.4
CD40P25942 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.4
CD40P25942 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
CD40P25942 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.4
CD40P25942 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CD40P25942 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC6.27□□□□□ -1.41
CD40P25942 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC6.27□□□□□ -1.41
CD40P25942 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.41
CD40P25942 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.27□□□□□ -1.41
CD40P25942 NCOA4P2-201ENST00000340589 1813 ntBASIC6.27□□□□□ -1.41
CD40P25942 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CD40P25942 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
CD40P25942 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.27□□□□□ -1.41
CD40P25942 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms