Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
POLR2AP24928 RNA5SP132-201ENST00000364725 118 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 AC096537.2-201ENST00000413707 714 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 AC093155.2-201ENST00000420734 937 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC7.35□□□□□ -1.23
POLR2AP24928 AL121776.1-201ENST00000429337 372 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 MORF4-201ENST00000447135 971 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.35□□□□□ -1.23
POLR2AP24928 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.35□□□□□ -1.23
POLR2AP24928 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.35□□□□□ -1.23
POLR2AP24928 ZNF322P1-201ENST00000568013 1209 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.35□□□□□ -1.23
POLR2AP24928 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
POLR2AP24928 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC7.35□□□□□ -1.23
POLR2AP24928 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.35□□□□□ -1.23
POLR2AP24928 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.35□□□□□ -1.23
POLR2AP24928 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
POLR2AP24928 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
POLR2AP24928 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC7.35□□□□□ -1.23
POLR2AP24928 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
POLR2AP24928 RN7SKP124-201ENST00000364730 341 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.35□□□□□ -1.23
POLR2AP24928 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC7.35□□□□□ -1.23
POLR2AP24928 AL136981.1-203ENST00000451452 3844 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 SIAH1P1-201ENST00000479411 923 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 AC009120.3-201ENST00000563335 499 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 RPAP2P1-201ENST00000603626 1168 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 AL589674.2-201ENST00000604304 337 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 BNIP3P35-201ENST00000604530 490 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 AC096861.1-201ENST00000616652 240 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 AC008147.4-201ENST00000617570 1204 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 AC012653.2-201ENST00000621880 420 ntBASIC7.35□□□□□ -1.23
POLR2AP24928 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.35□□□□□ -1.23
POLR2AP24928 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
POLR2AP24928 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
POLR2AP24928 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.34□□□□□ -1.23
POLR2AP24928 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
POLR2AP24928 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
POLR2AP24928 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
POLR2AP24928 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
POLR2AP24928 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
POLR2AP24928 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
POLR2AP24928 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
POLR2AP24928 MAPK10-287ENST00000641217 3037 ntBASIC7.34□□□□□ -1.23
POLR2AP24928 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.34□□□□□ -1.23
POLR2AP24928 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
POLR2AP24928 RNU1-46P-201ENST00000384425 164 ntBASIC7.34□□□□□ -1.23
POLR2AP24928 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.34□□□□□ -1.23
POLR2AP24928 RN7SL834P-201ENST00000461450 286 ntBASIC7.34□□□□□ -1.23
POLR2AP24928 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.34□□□□□ -1.23
POLR2AP24928 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.34□□□□□ -1.23
POLR2AP24928 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC7.34□□□□□ -1.23
POLR2AP24928 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.34□□□□□ -1.23
POLR2AP24928 AC010327.2-201ENST00000587647 488 ntBASIC7.34□□□□□ -1.23
POLR2AP24928 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.34□□□□□ -1.23
POLR2AP24928 AC034229.4-201ENST00000607861 441 ntBASIC7.34□□□□□ -1.23
POLR2AP24928 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.34□□□□□ -1.23
POLR2AP24928 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.34□□□□□ -1.23
POLR2AP24928 AL138960.2-201ENST00000625145 535 ntBASIC7.34□□□□□ -1.23
POLR2AP24928 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
POLR2AP24928 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
POLR2AP24928 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
POLR2AP24928 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
POLR2AP24928 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.34□□□□□ -1.23
POLR2AP24928 Z93929.1-201ENST00000418200 1475 ntBASIC7.34□□□□□ -1.23
POLR2AP24928 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
POLR2AP24928 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.34□□□□□ -1.23
POLR2AP24928 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
POLR2AP24928 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
POLR2AP24928 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.34□□□□□ -1.23
POLR2AP24928 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
POLR2AP24928 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.24
POLR2AP24928 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.34□□□□□ -1.24
POLR2AP24928 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
POLR2AP24928 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
POLR2AP24928 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 RPS2P45-201ENST00000469997 2057 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.33□□□□□ -1.24
POLR2AP24928 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC7.33□□□□□ -1.24
POLR2AP24928 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.33□□□□□ -1.24
POLR2AP24928 AC007394.1-201ENST00000421941 531 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC7.33□□□□□ -1.24
POLR2AP24928 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.33□□□□□ -1.24
POLR2AP24928 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.33□□□□□ -1.24
POLR2AP24928 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.33□□□□□ -1.24
POLR2AP24928 AC006530.1-201ENST00000555980 571 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.33□□□□□ -1.24
POLR2AP24928 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.33□□□□□ -1.24
POLR2AP24928 AL008723.3-201ENST00000608926 449 ntBASIC7.33□□□□□ -1.24
POLR2AP24928 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.33□□□□□ -1.24
POLR2AP24928 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
POLR2AP24928 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms