Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.84□□□□□ -1.31
O00370 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.84□□□□□ -1.31
O00370 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.84□□□□□ -1.31
O00370 AC073046.2-201ENST00000604756 527 ntBASIC6.84□□□□□ -1.31
O00370 TCL6_3.1-201ENST00000619064 137 ntBASIC6.84□□□□□ -1.31
O00370 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.84□□□□□ -1.31
O00370 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.84□□□□□ -1.31
O00370 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.84□□□□□ -1.31
O00370 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.84□□□□□ -1.31
O00370 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
O00370 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 AL353743.3-201ENST00000442109 1468 ntBASIC6.84□□□□□ -1.31
O00370 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
O00370 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.32
O00370 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
O00370 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
O00370 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
O00370 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.83□□□□□ -1.32
O00370 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
O00370 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
O00370 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
O00370 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
O00370 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
O00370 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.83□□□□□ -1.32
O00370 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
O00370 FAM32BP-201ENST00000344033 333 ntBASIC6.83□□□□□ -1.32
O00370 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
O00370 AL034417.1-201ENST00000399343 800 ntBASIC6.83□□□□□ -1.32
O00370 AL133260.1-201ENST00000405720 405 ntBASIC6.83□□□□□ -1.32
O00370 OR2W4P-201ENST00000406496 926 ntBASIC6.83□□□□□ -1.32
O00370 RNU6-233P-201ENST00000410845 141 ntBASIC6.83□□□□□ -1.32
O00370 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.83□□□□□ -1.32
O00370 Z82198.3-201ENST00000421145 199 ntBASIC6.83□□□□□ -1.32
O00370 AL139184.1-202ENST00000422303 222 ntBASIC6.83□□□□□ -1.32
O00370 GPN3P1-201ENST00000423883 535 ntBASIC6.83□□□□□ -1.32
O00370 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.83□□□□□ -1.32
O00370 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
O00370 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.83□□□□□ -1.32
O00370 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.83□□□□□ -1.32
O00370 AC099670.1-201ENST00000455141 783 ntBASIC6.83□□□□□ -1.32
O00370 RBMY2HP-201ENST00000457961 720 ntBASIC6.83□□□□□ -1.32
O00370 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
O00370 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.83□□□□□ -1.32
O00370 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.83□□□□□ -1.32
O00370 RN7SKP67-201ENST00000515905 235 ntBASIC6.83□□□□□ -1.32
O00370 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.83□□□□□ -1.32
O00370 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.83□□□□□ -1.32
O00370 RN7SL475P-201ENST00000583379 298 ntBASIC6.83□□□□□ -1.32
O00370 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.83□□□□□ -1.32
O00370 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.83□□□□□ -1.32
O00370 AC015819.1-201ENST00000613588 663 ntBASIC6.83□□□□□ -1.32
O00370 MIR6823-201ENST00000622118 61 ntBASIC6.83□□□□□ -1.32
O00370 AC089999.3-201ENST00000622440 577 ntBASIC6.83□□□□□ -1.32
O00370 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
O00370 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.83□□□□□ -1.32
O00370 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
O00370 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.83□□□□□ -1.32
O00370 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.83□□□□□ -1.32
O00370 ABCA11P-202ENST00000504019 2110 ntBASIC6.83□□□□□ -1.32
O00370 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
O00370 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.83□□□□□ -1.32
O00370 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
O00370 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
O00370 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
O00370 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.82□□□□□ -1.32
O00370 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
O00370 AC007114.2-201ENST00000576014 4281 ntBASIC6.82□□□□□ -1.32
O00370 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
O00370 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
O00370 AC099654.3-201ENST00000447087 1546 ntBASIC6.82□□□□□ -1.32
O00370 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
O00370 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
O00370 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.82□□□□□ -1.32
O00370 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
O00370 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
O00370 HSPD1P8-201ENST00000400121 1658 ntBASIC6.82□□□□□ -1.32
O00370 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
O00370 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
O00370 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
O00370 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.82□□□□□ -1.32
O00370 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
O00370 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.82□□□□□ -1.32
O00370 AC004890.1-201ENST00000461005 181 ntBASIC6.82□□□□□ -1.32
O00370 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
O00370 RN7SL612P-201ENST00000497704 295 ntBASIC6.82□□□□□ -1.32
O00370 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.82□□□□□ -1.32
O00370 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
O00370 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.82□□□□□ -1.32
O00370 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.82□□□□□ -1.32
O00370 AP003080.1-202ENST00000526526 915 ntBASIC6.82□□□□□ -1.32
O00370 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.82□□□□□ -1.32
O00370 AC124891.1-201ENST00000536322 519 ntBASIC6.82□□□□□ -1.32
O00370 TDGP1-201ENST00000543961 1229 ntBASIC6.82□□□□□ -1.32
O00370 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms