Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC006509.1-201ENST00000420788 634 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AL022319.1-201ENST00000458183 1167 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 RN7SL350P-201ENST00000492591 299 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC093870.1-201ENST00000506837 213 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC093664.1-201ENST00000511779 289 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 COX6B1P4-201ENST00000519826 484 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 TPRX1P1-201ENST00000557620 319 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 OR4C49P-201ENST00000563891 900 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 LINC02495-203ENST00000636704 242 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 AC005225.5-201ENST00000623547 2225 ntBASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.48□□□□□ -1.37
TCRBV7S3A2A0A539 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 RNU1-5P-201ENST00000362684 144 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 RN7SKP237-201ENST00000364663 301 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC092634.1-201ENST00000366505 199 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 SNORA7A-201ENST00000384765 139 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 MIR27A-201ENST00000385073 78 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC245036.1-201ENST00000391727 309 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC007562.1-201ENST00000421819 517 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC092646.1-201ENST00000427142 901 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 RPS10P14-201ENST00000440748 502 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 HMGN1P32-201ENST00000441744 256 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 COL11A2P1-205ENST00000441798 676 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC023274.2-201ENST00000445264 521 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 RPL36AP55-201ENST00000454114 305 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 SLC25A51P1-201ENST00000468432 871 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 OR9A1P-202ENST00000484361 945 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC134698.1-201ENST00000511619 643 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC135626.1-201ENST00000556983 435 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC009120.3-201ENST00000563335 499 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC018558.5-201ENST00000565840 952 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 OR7E19P-202ENST00000589942 844 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AL049840.6-202ENST00000603373 279 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AL021368.3-201ENST00000607119 578 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 AC016590.3-201ENST00000611171 753 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 MIR6737-201ENST00000617385 70 ntBASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TCRBV7S3A2A0A539 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms