Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.94□□□□□ -1.3
TRIM48Q8IWZ4 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AL356361.1-201ENST00000400943 1459 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC018688.1-201ENST00000636528 1754 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 PDCL3P5-201ENST00000398028 722 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 ATP5F1P2-201ENST00000398143 760 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 RN7SKP254-201ENST00000410685 310 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 MTCO3P4-201ENST00000419236 787 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AL121916.1-201ENST00000429405 308 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 UBE2V1P1-201ENST00000430836 445 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 Z73417.1-201ENST00000447373 778 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 RARRES2P3-201ENST00000457739 473 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC008868.1-201ENST00000509786 737 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC118465.1-201ENST00000513820 1271 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 MTCO1P47-201ENST00000523889 1271 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC004923.2-201ENST00000529649 369 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 TDGP1-201ENST00000543961 1229 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC009097.3-201ENST00000563557 1018 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC026458.1-201ENST00000564330 438 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 SIGLEC31P-201ENST00000594237 551 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AL358072.1-201ENST00000604156 575 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AP005329.3-201ENST00000609924 686 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC004232.3-201ENST00000622977 525 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC087894.3-201ENST00000623682 349 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AC010480.1-201ENST00000624823 684 ntBASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TRIM48Q8IWZ4 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 AC018765.1-201ENST00000623357 3446 ntBASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 AC120338.1-201ENST00000625074 1541 ntBASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 MIR187-201ENST00000385062 109 ntBASIC6.92□□□□□ -1.3
TRIM48Q8IWZ4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms