Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 RNU1-5P-201ENST00000362684 144 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 RNA5SP188-201ENST00000362916 129 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 SNORA38B-201ENST00000363524 131 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 RNU1-46P-201ENST00000384425 164 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AL589994.1-201ENST00000404962 340 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 CDC42P6-201ENST00000421246 576 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 H3F3BP1-201ENST00000440551 403 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 TVP23CP1-201ENST00000450317 639 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AC022080.2-201ENST00000452932 533 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 RN7SL83P-201ENST00000468131 297 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 RN7SL70P-201ENST00000478322 302 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 RPL17P2-201ENST00000491913 451 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 RPL5P14-201ENST00000494197 878 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 SUMO2P19-201ENST00000518920 295 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AC084337.1-201ENST00000524809 686 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AC084033.1-201ENST00000550830 633 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AL049874.4-201ENST00000557593 255 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AP001264.1-201ENST00000620602 703 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AC005514.1-201ENST00000623521 208 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 MAPK10-350ENST00000641777 965 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 CUL4AP1-201ENST00000514750 1863 ntBASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.87□□□□□ -1.47
NHLRC1Q6VVB1 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 PARP4P1-201ENST00000435945 2337 ntBASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 IMMTP1-201ENST00000435590 2219 ntBASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 RNA5SP442-201ENST00000365050 107 ntBASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 AC092634.1-201ENST00000366505 199 ntBASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 MRPS6P2-201ENST00000381143 370 ntBASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 AL691447.1-201ENST00000419456 387 ntBASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 RPL12P43-201ENST00000420608 499 ntBASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 RPS19P6-201ENST00000441327 433 ntBASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 H3F3AP3-201ENST00000497682 407 ntBASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 AC122714.1-201ENST00000502510 459 ntBASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NHLRC1Q6VVB1 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms