Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 LYPLA1P3-201ENST00000402650 695 ntBASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 RN7SKP296-201ENST00000411185 341 ntBASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 AC068228.1-201ENST00000461723 211 ntBASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 AC093719.1-201ENST00000480427 441 ntBASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 SCARNA21.2-201ENST00000516600 166 ntBASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 AC115989.2-201ENST00000578640 563 ntBASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 AC007423.1-201ENST00000605009 627 ntBASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 U1.41-201ENST00000617626 165 ntBASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 MIR6811-201ENST00000620409 58 ntBASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 AC022919.1-201ENST00000624979 626 ntBASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 AC099654.11-201ENST00000638857 294 ntBASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYCE2Q6PIF2 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC122713.2-201ENST00000624942 3335 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 RN7SKP69-201ENST00000365390 305 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 RNU6-1176P-201ENST00000390955 107 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AL078595.1-201ENST00000404458 226 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AL451046.1-201ENST00000406097 534 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 RN7SKP232-201ENST00000410170 290 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 HMGN1P20-201ENST00000411849 300 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 DHFRP2-201ENST00000414224 547 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 MTATP6P11-201ENST00000428071 670 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AP000949.1-201ENST00000438328 629 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 FABP5P2-201ENST00000439042 408 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 RPL19P11-201ENST00000495944 589 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC027369.2-201ENST00000528030 440 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 EIF4EP5-201ENST00000528228 640 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC036111.2-201ENST00000533247 901 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC027667.1-201ENST00000545814 304 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 ADAD1P2-201ENST00000588476 646 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC010463.3-201ENST00000594077 500 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC026951.2-201ENST00000613847 241 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AC009039.2-201ENST00000624524 529 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AL596275.2-203ENST00000641951 371 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 AL133243.4-201ENST00000623116 3109 ntBASIC6.9□□□□□ -1.3
SYCE2Q6PIF2 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 AC096992.2-201ENST00000609553 1684 ntBASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.9□□□□□ -1.31
SYCE2Q6PIF2 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYCE2Q6PIF2 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms