Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RPL24P7-201ENST00000399435 453 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 RN7SKP279-201ENST00000411383 298 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 SRSF1P1-201ENST00000424058 520 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AC009963.2-201ENST00000453431 138 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AL133445.1-201ENST00000467051 452 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AC098847.1-201ENST00000473094 348 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 RPL5P14-201ENST00000494197 878 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AP001922.4-201ENST00000526967 290 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 RNF138P2-201ENST00000603490 592 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 RPL12P48-201ENST00000605620 304 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AL445222.1-201ENST00000607259 628 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AC105105.5-201ENST00000622635 1294 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 PRNCR1-201ENST00000635449 12727 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 BX323845.3-201ENST00000428215 527 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 CYCSP51-201ENST00000443545 318 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AC093267.1-201ENST00000489176 961 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 RN7SL193P-201ENST00000491708 276 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 OR4A1P-201ENST00000532342 920 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 MIR4505-201ENST00000582238 73 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 OR7A1P-201ENST00000601206 970 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC6.2□□□□□ -1.42
RIF1Q5UIP0 PDZK1P1-202ENST00000425209 1350 ntBASIC6.2□□□□□ -1.42
RIF1Q5UIP0 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AL359694.2-201ENST00000567753 1615 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 RNA5SP507-201ENST00000363603 121 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC005077.1-201ENST00000449226 375 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC092865.4-201ENST00000477936 615 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 IGKV3D-31-201ENST00000519131 281 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC008429.2-201ENST00000523057 864 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AL157899.1-201ENST00000604110 936 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 RFPL4AP6-201ENST00000616792 846 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC009237.3-203ENST00000442128 3551 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 RN7SKP124-201ENST00000364730 341 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 RPL9P21-201ENST00000392269 505 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 RN7SKP273-201ENST00000411392 314 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 VN1R54P-201ENST00000435210 1049 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 DNAJB5P1-201ENST00000454004 806 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 GYG1P1-201ENST00000460864 698 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 STRADBP1-201ENST00000478954 1281 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.19□□□□□ -1.42
RIF1Q5UIP0 AC024558.1-201ENST00000505008 528 ntBASIC6.19□□□□□ -1.42
RIF1Q5UIP0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms