Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.75□□□□□ -1.49
H3F3AP84243 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 AKAP17BP-201ENST00000431706 2719 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.75□□□□□ -1.49
H3F3AP84243 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.74□□□□□ -1.49
H3F3AP84243 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.74□□□□□ -1.49
H3F3AP84243 AC125238.2-201ENST00000430003 1440 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.74□□□□□ -1.49
H3F3AP84243 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
H3F3AP84243 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 ZNF402P-201ENST00000404435 3100 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.74□□□□□ -1.49
H3F3AP84243 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 SNORD16-201ENST00000362803 99 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 RNA5SP514-201ENST00000363717 111 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.74□□□□□ -1.49
H3F3AP84243 RN7SKP129-201ENST00000410288 299 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.74□□□□□ -1.49
H3F3AP84243 AL360013.1-201ENST00000419031 858 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 FAM183DP-201ENST00000421987 399 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.74□□□□□ -1.49
H3F3AP84243 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.74□□□□□ -1.49
H3F3AP84243 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.74□□□□□ -1.49
H3F3AP84243 AC099670.1-201ENST00000455141 783 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 SNX18P26-201ENST00000458433 740 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.74□□□□□ -1.49
H3F3AP84243 OR51A1P-201ENST00000511110 946 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.74□□□□□ -1.49
H3F3AP84243 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.74□□□□□ -1.49
H3F3AP84243 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.74□□□□□ -1.49
H3F3AP84243 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.74□□□□□ -1.49
H3F3AP84243 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
H3F3AP84243 RN7SL475P-201ENST00000583379 298 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.74□□□□□ -1.49
H3F3AP84243 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.74□□□□□ -1.49
H3F3AP84243 AC067852.5-201ENST00000589299 310 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 AC005479.3-201ENST00000602790 431 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 AC073046.2-201ENST00000604756 527 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.74□□□□□ -1.49
H3F3AP84243 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.74□□□□□ -1.49
H3F3AP84243 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.74□□□□□ -1.49
H3F3AP84243 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.74□□□□□ -1.49
H3F3AP84243 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.74□□□□□ -1.49
H3F3AP84243 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.74□□□□□ -1.49
H3F3AP84243 TTC41P-205ENST00000551270 3963 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.74□□□□□ -1.49
H3F3AP84243 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H3F3AP84243 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
H3F3AP84243 AP003486.1-201ENST00000525716 3994 ntBASIC5.74□□□□□ -1.49
H3F3AP84243 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.73□□□□□ -1.49
H3F3AP84243 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
H3F3AP84243 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 AC034229.2-201ENST00000566945 2508 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.73□□□□□ -1.49
H3F3AP84243 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 RN7SKP184-201ENST00000362348 333 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.73□□□□□ -1.49
H3F3AP84243 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 AL157884.1-201ENST00000424561 454 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 GTF3AP6-201ENST00000432585 986 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 AL451136.1-201ENST00000435399 325 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 AC092601.1-201ENST00000444526 383 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 KF459542.1-201ENST00000450908 553 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.73□□□□□ -1.49
H3F3AP84243 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.73□□□□□ -1.49
H3F3AP84243 RPS7P10-201ENST00000464254 603 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.73□□□□□ -1.49
H3F3AP84243 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H3F3AP84243 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.73□□□□□ -1.49
H3F3AP84243 AC106800.3-201ENST00000511389 308 ntBASIC5.73□□□□□ -1.49
H3F3AP84243 AP003080.1-202ENST00000526526 915 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms