Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.36□□□□□ -1.23
CCNA1P78396 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.36□□□□□ -1.23
CCNA1P78396 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.36□□□□□ -1.23
CCNA1P78396 SAGE3P-201ENST00000619800 1635 ntBASIC7.36□□□□□ -1.23
CCNA1P78396 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCNA1P78396 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCNA1P78396 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCNA1P78396 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CCNA1P78396 OR52B5P-204ENST00000641744 3467 ntBASIC7.36□□□□□ -1.23
CCNA1P78396 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.36□□□□□ -1.23
CCNA1P78396 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.36□□□□□ -1.23
CCNA1P78396 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.35□□□□□ -1.23
CCNA1P78396 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCNA1P78396 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
CCNA1P78396 MFSD8-217ENST00000641178 4374 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCNA1P78396 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCNA1P78396 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CCNA1P78396 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.35□□□□□ -1.23
CCNA1P78396 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.35□□□□□ -1.23
CCNA1P78396 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CCNA1P78396 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.35□□□□□ -1.23
CCNA1P78396 SLC20A1P1-201ENST00000413906 956 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 RPS3P2-201ENST00000421346 701 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 AC066692.1-201ENST00000421721 457 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.35□□□□□ -1.23
CCNA1P78396 FTH1P10-202ENST00000430907 550 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 RPL23AP68-201ENST00000480924 445 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 AC083906.1-201ENST00000509298 406 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 OR4D12P-201ENST00000509361 911 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 OR51A1P-201ENST00000511110 946 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 IGKV3D-25-201ENST00000519599 235 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.35□□□□□ -1.23
CCNA1P78396 AP000894.4-201ENST00000610185 483 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.35□□□□□ -1.23
CCNA1P78396 AL512356.3-201ENST00000623005 461 ntBASIC7.35□□□□□ -1.23
CCNA1P78396 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.35□□□□□ -1.23
CCNA1P78396 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCNA1P78396 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
CCNA1P78396 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.35□□□□□ -1.23
CCNA1P78396 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.35□□□□□ -1.23
CCNA1P78396 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCNA1P78396 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CCNA1P78396 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.35□□□□□ -1.23
CCNA1P78396 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.35□□□□□ -1.23
CCNA1P78396 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.35□□□□□ -1.23
CCNA1P78396 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCNA1P78396 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.35□□□□□ -1.23
CCNA1P78396 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCNA1P78396 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.35□□□□□ -1.23
CCNA1P78396 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.35□□□□□ -1.23
CCNA1P78396 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CCNA1P78396 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.34□□□□□ -1.23
CCNA1P78396 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 RNA5SP510-201ENST00000364697 99 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 RNU1-46P-201ENST00000384425 164 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 RN7SKP206-201ENST00000410823 293 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 AC104843.2-201ENST00000427666 297 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.34□□□□□ -1.23
CCNA1P78396 PPIAP7-201ENST00000454070 489 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 RN7SL714P-201ENST00000487050 298 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.34□□□□□ -1.23
CCNA1P78396 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.34□□□□□ -1.23
CCNA1P78396 AP000620.1-201ENST00000527147 504 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.34□□□□□ -1.23
CCNA1P78396 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.34□□□□□ -1.23
CCNA1P78396 MIR3614-201ENST00000581261 86 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.34□□□□□ -1.23
CCNA1P78396 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 AL357153.4-201ENST00000620487 1016 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 AC073862.4-201ENST00000622982 854 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 FO681491.1-202ENST00000623392 737 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.34□□□□□ -1.23
CCNA1P78396 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.34□□□□□ -1.23
CCNA1P78396 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.34□□□□□ -1.23
CCNA1P78396 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.34□□□□□ -1.23
CCNA1P78396 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.34□□□□□ -1.23
CCNA1P78396 AL139384.2-201ENST00000613809 3590 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.34□□□□□ -1.23
CCNA1P78396 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
CCNA1P78396 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.34□□□□□ -1.23
CCNA1P78396 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CCNA1P78396 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 CASC19-228ENST00000641414 1684 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCNA1P78396 AL136984.1-201ENST00000607611 1893 ntBASIC7.34□□□□□ -1.23
CCNA1P78396 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
CCNA1P78396 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.24
CCNA1P78396 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.34□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms