Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.07□□□□□ -1.28
TPM4P67936 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
TPM4P67936 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TPM4P67936 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
TPM4P67936 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TPM4P67936 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TPM4P67936 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TPM4P67936 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.07□□□□□ -1.28
TPM4P67936 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM4P67936 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.06□□□□□ -1.28
TPM4P67936 SMG1P5-202ENST00000529428 4219 ntBASIC7.06□□□□□ -1.28
TPM4P67936 SMG1P2-201ENST00000566127 4221 ntBASIC7.06□□□□□ -1.28
TPM4P67936 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
TPM4P67936 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM4P67936 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM4P67936 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.06□□□□□ -1.28
TPM4P67936 AC074375.1-201ENST00000372993 192 ntBASIC7.06□□□□□ -1.28
TPM4P67936 AL079341.1-201ENST00000404701 1207 ntBASIC7.06□□□□□ -1.28
TPM4P67936 AL096800.1-201ENST00000405326 893 ntBASIC7.06□□□□□ -1.28
TPM4P67936 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.06□□□□□ -1.28
TPM4P67936 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.06□□□□□ -1.28
TPM4P67936 AL139184.1-202ENST00000422303 222 ntBASIC7.06□□□□□ -1.28
TPM4P67936 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC7.06□□□□□ -1.28
TPM4P67936 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.06□□□□□ -1.28
TPM4P67936 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.06□□□□□ -1.28
TPM4P67936 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.06□□□□□ -1.28
TPM4P67936 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.06□□□□□ -1.28
TPM4P67936 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.06□□□□□ -1.28
TPM4P67936 snoU13.29-201ENST00000459370 104 ntBASIC7.06□□□□□ -1.28
TPM4P67936 AC090058.1-201ENST00000498788 435 ntBASIC7.06□□□□□ -1.28
TPM4P67936 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC7.06□□□□□ -1.28
TPM4P67936 AC097460.2-201ENST00000511857 741 ntBASIC7.06□□□□□ -1.28
TPM4P67936 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.06□□□□□ -1.28
TPM4P67936 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.06□□□□□ -1.28
TPM4P67936 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.06□□□□□ -1.28
TPM4P67936 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.06□□□□□ -1.28
TPM4P67936 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.06□□□□□ -1.28
TPM4P67936 AC069234.4-201ENST00000621276 412 ntBASIC7.06□□□□□ -1.28
TPM4P67936 AC061999.1-201ENST00000624454 177 ntBASIC7.06□□□□□ -1.28
TPM4P67936 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.06□□□□□ -1.28
TPM4P67936 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM4P67936 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM4P67936 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM4P67936 AC140134.1-201ENST00000511830 3544 ntBASIC7.06□□□□□ -1.28
TPM4P67936 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TPM4P67936 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM4P67936 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TPM4P67936 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TPM4P67936 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
TPM4P67936 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TPM4P67936 NLRP3P1-201ENST00000622303 1785 ntBASIC7.05□□□□□ -1.28
TPM4P67936 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
TPM4P67936 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.05□□□□□ -1.28
TPM4P67936 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.05□□□□□ -1.28
TPM4P67936 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.05□□□□□ -1.28
TPM4P67936 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TPM4P67936 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TPM4P67936 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
TPM4P67936 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
TPM4P67936 RNA5SP152-201ENST00000365184 110 ntBASIC7.05□□□□□ -1.28
TPM4P67936 MIR187-201ENST00000385062 109 ntBASIC7.05□□□□□ -1.28
TPM4P67936 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TPM4P67936 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TPM4P67936 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.05□□□□□ -1.28
TPM4P67936 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.05□□□□□ -1.28
TPM4P67936 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.05□□□□□ -1.28
TPM4P67936 SNRPCP3-201ENST00000474888 476 ntBASIC7.05□□□□□ -1.28
TPM4P67936 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.05□□□□□ -1.28
TPM4P67936 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.05□□□□□ -1.28
TPM4P67936 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.05□□□□□ -1.28
TPM4P67936 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.05□□□□□ -1.28
TPM4P67936 RN7SL311P-201ENST00000579858 306 ntBASIC7.05□□□□□ -1.28
TPM4P67936 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.05□□□□□ -1.28
TPM4P67936 AC245052.7-201ENST00000601161 359 ntBASIC7.05□□□□□ -1.28
TPM4P67936 AC005899.7-201ENST00000618199 588 ntBASIC7.05□□□□□ -1.28
TPM4P67936 AC127071.2-201ENST00000623293 527 ntBASIC7.05□□□□□ -1.28
TPM4P67936 AC003992.1-201ENST00000635364 557 ntBASIC7.05□□□□□ -1.28
TPM4P67936 RALGAPA1P1-201ENST00000443361 6232 ntBASIC7.05□□□□□ -1.28
TPM4P67936 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC7.05□□□□□ -1.28
TPM4P67936 GUCY1B2-204ENST00000531898 1979 ntBASIC7.05□□□□□ -1.28
TPM4P67936 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TPM4P67936 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
TPM4P67936 AC123769.1-201ENST00000530992 3192 ntBASIC7.05□□□□□ -1.28
TPM4P67936 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.05□□□□□ -1.28
TPM4P67936 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
TPM4P67936 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
TPM4P67936 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TPM4P67936 AC232271.1-201ENST00000602455 2715 ntBASIC7.05□□□□□ -1.28
TPM4P67936 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.05□□□□□ -1.28
TPM4P67936 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TPM4P67936 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
TPM4P67936 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM4P67936 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM4P67936 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
TPM4P67936 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM4P67936 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM4P67936 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM4P67936 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TPM4P67936 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TPM4P67936 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms