Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HLA-DQA1P01909 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC102941.1-201ENST00000567616 1537 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 FAUP2-201ENST00000394301 401 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 EIF4A1P13-201ENST00000415667 230 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 NIP7P1-201ENST00000433227 512 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC073410.1-201ENST00000435125 589 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 PRKAR1AP1-201ENST00000441422 1162 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 ANK3-213ENST00000486349 493 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 ENPP7P3-201ENST00000509123 241 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC016559.1-201ENST00000511420 199 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 RN7SKP242-201ENST00000515967 289 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 OR8Q1P-201ENST00000526467 655 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AL132640.2-202ENST00000559732 614 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC024614.1-201ENST00000577546 307 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC027334.1-201ENST00000603257 310 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AC002069.2-201ENST00000603580 883 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AL157762.1-201ENST00000619612 415 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 MIR6829-201ENST00000620375 67 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 SNORA16A-202ENST00000628458 135 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 AL031595.2-201ENST00000624215 19071 ntBASIC4.77□□□□□ -1.65
HLA-DQA1P01909 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HLA-DQA1P01909 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC138907.8-201ENST00000623981 2256 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 RNU6-673P-201ENST00000365084 104 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 U3.14-201ENST00000365363 227 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 MIR301B-201ENST00000390813 78 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 RNU11-6P-201ENST00000391127 133 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 PEX12P1-201ENST00000400284 1048 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 RN7SKP30-201ENST00000411373 334 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 CAP1P2-201ENST00000417455 1409 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 GRPEL2P2-201ENST00000421856 670 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 CLCN3P1-201ENST00000423965 1017 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC4.76□□□□□ -1.65
HLA-DQA1P01909 CR391992.1-201ENST00000438601 394 ntBASIC4.76□□□□□ -1.65
HLA-DQA1P01909 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms