Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX3O60493 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.17□□□□□ -1.42
SNX3O60493 AC091133.5-201ENST00000603088 301 ntBASIC6.17□□□□□ -1.42
SNX3O60493 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.17□□□□□ -1.42
SNX3O60493 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.17□□□□□ -1.42
SNX3O60493 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX3O60493 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX3O60493 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNX3O60493 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.17□□□□□ -1.42
SNX3O60493 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX3O60493 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX3O60493 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX3O60493 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX3O60493 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX3O60493 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 AC022325.1-201ENST00000502748 2199 ntBASIC6.16□□□□□ -1.42
SNX3O60493 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX3O60493 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SNX3O60493 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 AL391419.1-201ENST00000398901 1275 ntBASIC6.16□□□□□ -1.42
SNX3O60493 OR7E91P-201ENST00000400027 866 ntBASIC6.16□□□□□ -1.42
SNX3O60493 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX3O60493 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX3O60493 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX3O60493 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 AC244033.1-201ENST00000426826 870 ntBASIC6.16□□□□□ -1.42
SNX3O60493 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX3O60493 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX3O60493 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX3O60493 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX3O60493 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC6.16□□□□□ -1.42
SNX3O60493 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX3O60493 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX3O60493 OR7E102P-201ENST00000448855 1015 ntBASIC6.16□□□□□ -1.42
SNX3O60493 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
SNX3O60493 OR9A1P-202ENST00000484361 945 ntBASIC6.16□□□□□ -1.42
SNX3O60493 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX3O60493 RPL19P11-201ENST00000495944 589 ntBASIC6.16□□□□□ -1.42
SNX3O60493 RN7SL182P-201ENST00000496499 300 ntBASIC6.16□□□□□ -1.42
SNX3O60493 snoU109.5-201ENST00000516231 132 ntBASIC6.16□□□□□ -1.42
SNX3O60493 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX3O60493 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX3O60493 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX3O60493 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.16□□□□□ -1.42
SNX3O60493 AL589765.5-201ENST00000596133 515 ntBASIC6.16□□□□□ -1.42
SNX3O60493 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX3O60493 AC006924.1-201ENST00000610750 559 ntBASIC6.16□□□□□ -1.42
SNX3O60493 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.16□□□□□ -1.42
SNX3O60493 AC087893.2-201ENST00000623272 255 ntBASIC6.16□□□□□ -1.42
SNX3O60493 AL035425.4-201ENST00000624509 1063 ntBASIC6.16□□□□□ -1.42
SNX3O60493 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
SNX3O60493 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX3O60493 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
SNX3O60493 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SNX3O60493 PSMC1P4-201ENST00000515236 1327 ntBASIC6.16□□□□□ -1.42
SNX3O60493 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
SNX3O60493 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX3O60493 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNX3O60493 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX3O60493 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
SNX3O60493 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX3O60493 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SNX3O60493 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX3O60493 U3.14-201ENST00000365363 227 ntBASIC6.15□□□□□ -1.42
SNX3O60493 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX3O60493 AC074375.1-201ENST00000372993 192 ntBASIC6.15□□□□□ -1.42
SNX3O60493 AL445238.1-204ENST00000400311 463 ntBASIC6.15□□□□□ -1.42
SNX3O60493 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX3O60493 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX3O60493 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX3O60493 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX3O60493 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX3O60493 MTCO3P17-201ENST00000443775 513 ntBASIC6.15□□□□□ -1.42
SNX3O60493 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX3O60493 SNORA35.1-201ENST00000458908 128 ntBASIC6.15□□□□□ -1.42
SNX3O60493 AC073594.1-201ENST00000462065 364 ntBASIC6.15□□□□□ -1.42
SNX3O60493 RN7SL282P-201ENST00000479676 297 ntBASIC6.15□□□□□ -1.42
SNX3O60493 RPL34P29-201ENST00000491411 325 ntBASIC6.15□□□□□ -1.42
SNX3O60493 AL135933.1-201ENST00000498657 802 ntBASIC6.15□□□□□ -1.42
SNX3O60493 LDHAP1-201ENST00000509421 992 ntBASIC6.15□□□□□ -1.42
SNX3O60493 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX3O60493 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.15□□□□□ -1.42
SNX3O60493 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX3O60493 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX3O60493 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNX3O60493 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX3O60493 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX3O60493 AC020916.2-201ENST00000591242 360 ntBASIC6.15□□□□□ -1.42
SNX3O60493 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX3O60493 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNX3O60493 AC104117.5-201ENST00000606195 547 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms