Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
O00370 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.86□□□□□ -1.31
O00370 AC011455.2-201ENST00000599320 3336 ntBASIC6.86□□□□□ -1.31
O00370 LCOR-201ENST00000286067 4542 ntBASIC6.86□□□□□ -1.31
O00370 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.86□□□□□ -1.31
O00370 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
O00370 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
O00370 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
O00370 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.86□□□□□ -1.31
O00370 AC017035.1-201ENST00000411999 1115 ntBASIC6.86□□□□□ -1.31
O00370 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.86□□□□□ -1.31
O00370 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.86□□□□□ -1.31
O00370 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
O00370 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
O00370 RPL12P49-201ENST00000441100 121 ntBASIC6.86□□□□□ -1.31
O00370 AC092601.1-201ENST00000444526 383 ntBASIC6.86□□□□□ -1.31
O00370 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.86□□□□□ -1.31
O00370 AC022206.1-201ENST00000495947 347 ntBASIC6.86□□□□□ -1.31
O00370 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.86□□□□□ -1.31
O00370 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.86□□□□□ -1.31
O00370 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.86□□□□□ -1.31
O00370 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.86□□□□□ -1.31
O00370 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.86□□□□□ -1.31
O00370 OR4A6P-201ENST00000534364 970 ntBASIC6.86□□□□□ -1.31
O00370 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.86□□□□□ -1.31
O00370 AC037479.1-201ENST00000558361 625 ntBASIC6.86□□□□□ -1.31
O00370 AC025283.1-201ENST00000572039 734 ntBASIC6.86□□□□□ -1.31
O00370 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.86□□□□□ -1.31
O00370 AL589743.6-201ENST00000611025 117 ntBASIC6.86□□□□□ -1.31
O00370 AL352984.2-202ENST00000613699 155 ntBASIC6.86□□□□□ -1.31
O00370 HTR1DP1-201ENST00000616500 888 ntBASIC6.86□□□□□ -1.31
O00370 MIR6085-201ENST00000618314 110 ntBASIC6.86□□□□□ -1.31
O00370 AC012254.5-201ENST00000623573 478 ntBASIC6.86□□□□□ -1.31
O00370 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
O00370 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
O00370 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.86□□□□□ -1.31
O00370 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
O00370 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
O00370 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
O00370 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.86□□□□□ -1.31
O00370 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
O00370 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
O00370 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
O00370 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.86□□□□□ -1.31
O00370 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
O00370 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
O00370 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
O00370 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
O00370 SNORD35A-201ENST00000363389 86 ntBASIC6.85□□□□□ -1.31
O00370 AL451046.1-201ENST00000406097 534 ntBASIC6.85□□□□□ -1.31
O00370 FAM183DP-201ENST00000421987 399 ntBASIC6.85□□□□□ -1.31
O00370 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.85□□□□□ -1.31
O00370 AL356121.1-201ENST00000442911 156 ntBASIC6.85□□□□□ -1.31
O00370 CCNJP2-201ENST00000457810 1163 ntBASIC6.85□□□□□ -1.31
O00370 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.85□□□□□ -1.31
O00370 AC138517.1-201ENST00000515724 568 ntBASIC6.85□□□□□ -1.31
O00370 AP001804.1-201ENST00000526868 919 ntBASIC6.85□□□□□ -1.31
O00370 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.85□□□□□ -1.31
O00370 AC090115.2-201ENST00000548060 883 ntBASIC6.85□□□□□ -1.31
O00370 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
O00370 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.85□□□□□ -1.31
O00370 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
O00370 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.85□□□□□ -1.31
O00370 AC005479.3-201ENST00000602790 431 ntBASIC6.85□□□□□ -1.31
O00370 AL352984.2-201ENST00000611153 546 ntBASIC6.85□□□□□ -1.31
O00370 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.85□□□□□ -1.31
O00370 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
O00370 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
O00370 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
O00370 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
O00370 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
O00370 MAPK10-270ENST00000641102 3538 ntBASIC6.85□□□□□ -1.31
O00370 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
O00370 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
O00370 AC139426.3-201ENST00000605648 2059 ntBASIC6.85□□□□□ -1.31
O00370 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.84□□□□□ -1.31
O00370 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 SMG1P5-202ENST00000529428 4219 ntBASIC6.84□□□□□ -1.31
O00370 SMG1P2-201ENST00000566127 4221 ntBASIC6.84□□□□□ -1.31
O00370 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.84□□□□□ -1.31
O00370 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
O00370 SNORA64.3-201ENST00000365647 134 ntBASIC6.84□□□□□ -1.31
O00370 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.84□□□□□ -1.31
O00370 RN7SKP129-201ENST00000410288 299 ntBASIC6.84□□□□□ -1.31
O00370 RN7SKP281-201ENST00000410472 352 ntBASIC6.84□□□□□ -1.31
O00370 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.84□□□□□ -1.31
O00370 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.84□□□□□ -1.31
O00370 AC097721.1-201ENST00000427150 1253 ntBASIC6.84□□□□□ -1.31
O00370 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.84□□□□□ -1.31
O00370 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.84□□□□□ -1.31
O00370 ARMC4P1-201ENST00000438905 707 ntBASIC6.84□□□□□ -1.31
O00370 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.84□□□□□ -1.31
O00370 MGAT2P1-201ENST00000449718 797 ntBASIC6.84□□□□□ -1.31
O00370 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.84□□□□□ -1.31
O00370 AC091965.3-201ENST00000506236 208 ntBASIC6.84□□□□□ -1.31
O00370 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms