Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC007938.1-201ENST00000562524 2902 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AL021877.2-201ENST00000624442 10684 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 RNA5SP433-201ENST00000364491 114 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 U3.52-201ENST00000384034 216 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 RN7SKP240-201ENST00000410583 375 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AL663061.1-201ENST00000416625 580 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 VN1R20P-201ENST00000425215 966 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 HMGN1P6-201ENST00000438508 291 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 C1DP3-201ENST00000455013 423 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 RN7SL552P-201ENST00000462094 276 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 TRBV8-1-201ENST00000481590 279 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC090568.1-201ENST00000509499 856 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 OR4R2P-201ENST00000530815 597 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 CR383656.14-201ENST00000551951 406 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC092718.4-201ENST00000566639 716 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC004223.2-201ENST00000590309 544 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC008147.4-201ENST00000617570 1204 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC025262.3-201ENST00000623666 360 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AP001962.1-201ENST00000624114 559 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 QRSL1P1-201ENST00000400977 1540 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 API5P1-201ENST00000424316 1510 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 SNORA38B-201ENST00000363524 131 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AC002127.1-201ENST00000421305 225 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 FABP5P1-201ENST00000423401 411 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 GAPDHP59-201ENST00000435908 267 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AC002486.2-201ENST00000447806 590 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 RPL12P24-201ENST00000474907 486 ntBASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC187A0A096LP49 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms