Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LINC01355-201ENST00000566551 5444 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AC011504.1-201ENST00000623331 4103 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AC023886.2-201ENST00000321285 411 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 GNG5P2-201ENST00000372054 207 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 RNA5SP280-201ENST00000411230 115 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AC097721.1-201ENST00000427150 1253 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 ANXA2P2-201ENST00000435128 1020 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 ST13P2-201ENST00000438916 1109 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AL390879.1-201ENST00000439143 386 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AC019080.2-201ENST00000453859 394 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 CCNJP2-201ENST00000457810 1163 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 RN7SL552P-201ENST00000462094 276 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 RPL23AP68-201ENST00000480924 445 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 RN7SL518P-201ENST00000491887 280 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 NPM1P28-201ENST00000492269 840 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AC091965.3-201ENST00000506236 208 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 SNORA70.11-201ENST00000515987 138 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 SNORA70.13-201ENST00000516116 138 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 RN7SKP11-201ENST00000517018 287 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 NDUFA3P2-201ENST00000531434 232 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AC009852.2-201ENST00000567898 485 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AC005495.1-201ENST00000586611 1211 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 NDUFA3P1-201ENST00000588007 252 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AL022394.1-201ENST00000606979 292 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 pRNA.9-201ENST00000618609 89 ntBASIC4.8□□□□□ -1.64
AP1S3Q96PC3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.8□□□□□ -1.64
AP1S3Q96PC3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC093591.2-201ENST00000565254 3843 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC105235.1-201ENST00000623208 1816 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AL512353.3-201ENST00000417517 1326 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 RNA5SP474-201ENST00000391234 90 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 HMGA1P8-201ENST00000414130 321 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AL354766.1-201ENST00000423396 542 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 CYP4F34P-201ENST00000425951 481 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC134879.1-201ENST00000426062 394 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC009518.3-201ENST00000438972 253 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 RPL29P7-201ENST00000440227 457 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 DBIL5P2-201ENST00000443827 253 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AL096803.1-201ENST00000456921 1021 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC008620.1-201ENST00000468453 592 ntBASIC4.79□□□□□ -1.64
AP1S3Q96PC3 ANK3-213ENST00000486349 493 ntTSL 2 BASIC4.79□□□□□ -1.64
AP1S3Q96PC3 AC114728.1-201ENST00000488289 483 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms