Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 FTO-202ENST00000431610 707 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 HMGN1P2-201ENST00000445197 310 ntBASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AL022237.1-201ENST00000446663 358 ntBASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AC144530.1-201ENST00000452862 555 ntBASIC9.77□□□□□ -0.85
VPS8Q8N3P4 LSM3P4-201ENST00000502948 309 ntBASIC9.77□□□□□ -0.85
VPS8Q8N3P4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AC091167.5-201ENST00000605689 894 ntBASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AL021368.3-201ENST00000607119 578 ntBASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AP001052.1-201ENST00000626421 99 ntBASIC9.77□□□□□ -0.85
VPS8Q8N3P4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS8Q8N3P4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 RN7SKP144-201ENST00000411108 279 ntBASIC9.76□□□□□ -0.85
VPS8Q8N3P4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 RBMY2AP-201ENST00000445405 1157 ntBASIC9.76□□□□□ -0.85
VPS8Q8N3P4 RBMY2CP-201ENST00000448575 1157 ntBASIC9.76□□□□□ -0.85
VPS8Q8N3P4 RBMY2DP-202ENST00000448881 1157 ntBASIC9.76□□□□□ -0.85
VPS8Q8N3P4 RBMY2BP-202ENST00000451071 1156 ntBASIC9.76□□□□□ -0.85
VPS8Q8N3P4 PPIAP27-201ENST00000453800 265 ntBASIC9.76□□□□□ -0.85
VPS8Q8N3P4 VPS25P1-201ENST00000455691 508 ntBASIC9.76□□□□□ -0.85
VPS8Q8N3P4 RNA5SP400-201ENST00000517155 111 ntBASIC9.76□□□□□ -0.85
VPS8Q8N3P4 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 OR4H6P-201ENST00000563771 921 ntBASIC9.76□□□□□ -0.85
VPS8Q8N3P4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 NPL-212ENST00000614468 2376 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 AC004014.2-201ENST00000623718 5122 ntBASIC9.76□□□□□ -0.85
VPS8Q8N3P4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 TMEM75-201ENST00000624314 2165 ntBASIC9.76□□□□□ -0.85
VPS8Q8N3P4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
VPS8Q8N3P4 AP001541.1-201ENST00000623322 1904 ntBASIC9.75□□□□□ -0.85
VPS8Q8N3P4 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 AC103563.5-201ENST00000455643 364 ntBASIC9.75□□□□□ -0.85
VPS8Q8N3P4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 STARD6-202ENST00000577499 696 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 Six3os1_2.1-201ENST00000616963 217 ntBASIC9.75□□□□□ -0.85
VPS8Q8N3P4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC9.75□□□□□ -0.85
VPS8Q8N3P4 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 SUMO2P10-201ENST00000452006 288 ntBASIC9.74□□□□□ -0.85
VPS8Q8N3P4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 IGHVII-60-1-201ENST00000519079 256 ntBASIC9.74□□□□□ -0.85
VPS8Q8N3P4 AC092332.1-201ENST00000563684 829 ntBASIC9.74□□□□□ -0.85
VPS8Q8N3P4 AC008507.3-201ENST00000585753 472 ntBASIC9.74□□□□□ -0.85
VPS8Q8N3P4 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 RFPL4AP6-201ENST00000616792 846 ntBASIC9.74□□□□□ -0.85
VPS8Q8N3P4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 JPX-212ENST00000639185 9658 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS8Q8N3P4 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms