Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 TNPO1P2-201ENST00000426249 2665 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC4P56524 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC4P56524 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC4P56524 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC4P56524 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
HDAC4P56524 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC4P56524 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HDAC4P56524 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
HDAC4P56524 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC4P56524 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC4P56524 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC4P56524 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.86□□□□□ -1.31
HDAC4P56524 TRAV35-201ENST00000390462 330 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
HDAC4P56524 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.86□□□□□ -1.31
HDAC4P56524 AL359092.1-201ENST00000417156 265 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 AL929472.1-201ENST00000417484 429 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 RFESDP1-201ENST00000422350 461 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 AL139415.1-201ENST00000424862 352 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 AL596268.1-201ENST00000427910 1048 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 Z68868.1-201ENST00000429048 544 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.86□□□□□ -1.31
HDAC4P56524 TVP23CP1-201ENST00000450317 639 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 AKR1D1P1-201ENST00000457236 936 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 RN7SL267P-201ENST00000485107 261 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 RPL5P33-201ENST00000487833 905 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC4P56524 RNU6-751P-201ENST00000516382 101 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.86□□□□□ -1.31
HDAC4P56524 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.86□□□□□ -1.31
HDAC4P56524 AC008429.2-201ENST00000523057 864 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC4P56524 AL162632.2-201ENST00000553933 399 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC4P56524 AC026956.1-201ENST00000558741 396 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.86□□□□□ -1.31
HDAC4P56524 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.86□□□□□ -1.31
HDAC4P56524 AC068408.1-201ENST00000577406 1144 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 AC025171.4-201ENST00000607250 1047 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC4P56524 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC4P56524 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC4P56524 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC4P56524 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.86□□□□□ -1.31
HDAC4P56524 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.86□□□□□ -1.31
HDAC4P56524 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC4P56524 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC4P56524 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
HDAC4P56524 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
HDAC4P56524 AC062022.1-201ENST00000451026 1684 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC4P56524 AL591848.4-201ENST00000567832 3472 ntBASIC6.86□□□□□ -1.31
HDAC4P56524 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC4P56524 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HDAC4P56524 AL391261.1-201ENST00000555712 1479 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.85□□□□□ -1.31
HDAC4P56524 CAP1P2-201ENST00000417455 1409 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.85□□□□□ -1.31
HDAC4P56524 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.85□□□□□ -1.31
HDAC4P56524 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC4P56524 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC4P56524 NEK2P2-201ENST00000438441 1338 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HDAC4P56524 AC022613.3-201ENST00000560740 1346 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC4P56524 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.85□□□□□ -1.31
HDAC4P56524 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC4P56524 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC4P56524 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HDAC4P56524 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC4P56524 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.85□□□□□ -1.31
HDAC4P56524 U3.52-201ENST00000384034 216 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 ARSFP1-201ENST00000398758 477 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 RPL5P20-201ENST00000403848 896 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 RN7SKP205-201ENST00000410999 307 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC4P56524 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.85□□□□□ -1.31
HDAC4P56524 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HDAC4P56524 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.85□□□□□ -1.31
HDAC4P56524 AC005165.2-201ENST00000466070 380 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 RPL5P16-201ENST00000471467 790 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.85□□□□□ -1.31
HDAC4P56524 RN7SL741P-201ENST00000482473 289 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 AC092824.1-201ENST00000483524 576 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 RN7SL649P-201ENST00000496974 275 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.85□□□□□ -1.31
HDAC4P56524 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.85□□□□□ -1.31
HDAC4P56524 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.85□□□□□ -1.31
HDAC4P56524 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HDAC4P56524 AC113191.1-201ENST00000517759 403 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 OR5D2P-201ENST00000524390 911 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 CHEK2P2-201ENST00000554701 672 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.85□□□□□ -1.31
HDAC4P56524 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.85□□□□□ -1.31
HDAC4P56524 MIR4301-201ENST00000577203 66 ntBASIC6.85□□□□□ -1.31
HDAC4P56524 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.85□□□□□ -1.31
HDAC4P56524 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms