Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC087821.1-201ENST00000623639 567 ntBASIC4.85□□□□□ -1.63
APOC4P55056 AP000577.1-201ENST00000624366 878 ntBASIC4.85□□□□□ -1.63
APOC4P55056 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOC4P55056 PSMC1P6-201ENST00000477233 1319 ntBASIC4.85□□□□□ -1.63
APOC4P55056 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.85□□□□□ -1.63
APOC4P55056 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC4.85□□□□□ -1.63
APOC4P55056 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
APOC4P55056 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.85□□□□□ -1.63
APOC4P55056 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC4.85□□□□□ -1.63
APOC4P55056 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOC4P55056 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
APOC4P55056 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOC4P55056 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.85□□□□□ -1.63
APOC4P55056 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOC4P55056 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
APOC4P55056 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOC4P55056 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
APOC4P55056 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
APOC4P55056 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC4.85□□□□□ -1.63
APOC4P55056 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOC4P55056 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOC4P55056 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC4.85□□□□□ -1.63
APOC4P55056 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOC4P55056 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
APOC4P55056 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC4.84□□□□□ -1.63
APOC4P55056 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
APOC4P55056 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.84□□□□□ -1.63
APOC4P55056 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC4.84□□□□□ -1.63
APOC4P55056 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
APOC4P55056 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.84□□□□□ -1.63
APOC4P55056 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
APOC4P55056 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
APOC4P55056 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
APOC4P55056 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC4.84□□□□□ -1.63
APOC4P55056 OFD1P10Y-201ENST00000434110 1433 ntBASIC4.84□□□□□ -1.63
APOC4P55056 AC022613.3-201ENST00000560740 1346 ntBASIC4.84□□□□□ -1.63
APOC4P55056 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
APOC4P55056 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 RNA5SP85-201ENST00000365378 119 ntBASIC4.84□□□□□ -1.63
APOC4P55056 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
APOC4P55056 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.84□□□□□ -1.63
APOC4P55056 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.84□□□□□ -1.63
APOC4P55056 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC4.84□□□□□ -1.63
APOC4P55056 AC003989.1-201ENST00000434569 565 ntBASIC4.84□□□□□ -1.63
APOC4P55056 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC4.84□□□□□ -1.63
APOC4P55056 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC4.84□□□□□ -1.63
APOC4P55056 VN1R96P-201ENST00000446052 858 ntBASIC4.84□□□□□ -1.63
APOC4P55056 CCNJP1-201ENST00000450600 1149 ntBASIC4.84□□□□□ -1.63
APOC4P55056 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.84□□□□□ -1.63
APOC4P55056 RPL19P11-201ENST00000495944 589 ntBASIC4.84□□□□□ -1.63
APOC4P55056 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
APOC4P55056 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC4.84□□□□□ -1.63
APOC4P55056 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.84□□□□□ -1.63
APOC4P55056 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC4.84□□□□□ -1.63
APOC4P55056 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC4.84□□□□□ -1.63
APOC4P55056 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.84□□□□□ -1.63
APOC4P55056 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC4.84□□□□□ -1.63
APOC4P55056 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.84□□□□□ -1.63
APOC4P55056 AC015849.6-201ENST00000605454 474 ntBASIC4.84□□□□□ -1.63
APOC4P55056 RPL12P48-201ENST00000605620 304 ntBASIC4.84□□□□□ -1.63
APOC4P55056 SNORD96A-201ENST00000606577 79 ntBASIC4.84□□□□□ -1.63
APOC4P55056 AL008582.1-201ENST00000609612 442 ntBASIC4.84□□□□□ -1.63
APOC4P55056 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.84□□□□□ -1.63
APOC4P55056 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC4.84□□□□□ -1.63
APOC4P55056 AC089999.3-201ENST00000622440 577 ntBASIC4.84□□□□□ -1.63
APOC4P55056 TSHZ2-205ENST00000626626 670 ntBASIC4.84□□□□□ -1.63
APOC4P55056 AC138627.1-204ENST00000641894 765 ntBASIC4.84□□□□□ -1.63
APOC4P55056 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
APOC4P55056 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC4.84□□□□□ -1.63
APOC4P55056 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
APOC4P55056 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
APOC4P55056 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.64
APOC4P55056 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC4.84□□□□□ -1.64
APOC4P55056 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
APOC4P55056 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC4.83□□□□□ -1.64
APOC4P55056 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
APOC4P55056 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms