Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 OR5M4P-201ENST00000529436 925 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 PHBP2-201ENST00000532859 806 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 OR7E161P-201ENST00000533722 967 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC104184.1-201ENST00000607513 721 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 AC091768.1-201ENST00000609258 930 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 AC027271.1-201ENST00000610270 610 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 AC008833.1-201ENST00000611633 691 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC005899.6-201ENST00000620729 297 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 uc_338.21-201ENST00000622458 147 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NR1H2P55055 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NR1H2P55055 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.39□□□□□ -1.39
NR1H2P55055 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.39□□□□□ -1.39
NR1H2P55055 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NR1H2P55055 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.39□□□□□ -1.39
NR1H2P55055 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NR1H2P55055 AC245100.2-201ENST00000454544 1679 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.39□□□□□ -1.39
NR1H2P55055 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.39□□□□□ -1.39
NR1H2P55055 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.38□□□□□ -1.39
NR1H2P55055 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
NR1H2P55055 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NR1H2P55055 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
NR1H2P55055 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NR1H2P55055 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.38□□□□□ -1.39
NR1H2P55055 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NR1H2P55055 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.38□□□□□ -1.39
NR1H2P55055 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NR1H2P55055 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NR1H2P55055 RNU6-1017P-201ENST00000363613 106 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NR1H2P55055 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.38□□□□□ -1.39
NR1H2P55055 AC009413.1-201ENST00000414823 399 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 AC021876.1-201ENST00000425959 359 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 NPM1P26-201ENST00000426339 738 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.38□□□□□ -1.39
NR1H2P55055 GAPDHP34-201ENST00000432112 823 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 PPIAP32-201ENST00000449940 472 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 AC002075.1-201ENST00000457396 676 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 STRADBP1-201ENST00000478954 1281 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.38□□□□□ -1.39
NR1H2P55055 RN7SL612P-201ENST00000497704 295 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 OR7E163P-201ENST00000505943 894 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.38□□□□□ -1.39
NR1H2P55055 CHCHD2P7-201ENST00000508008 452 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 AC114940.1-201ENST00000512162 1265 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
NR1H2P55055 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.38□□□□□ -1.39
NR1H2P55055 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.38□□□□□ -1.39
NR1H2P55055 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.38□□□□□ -1.39
NR1H2P55055 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.38□□□□□ -1.39
NR1H2P55055 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.38□□□□□ -1.39
NR1H2P55055 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.38□□□□□ -1.39
NR1H2P55055 CRADD-210ENST00000552033 622 ntTSL 3 BASIC6.38□□□□□ -1.39
NR1H2P55055 AL135978.1-201ENST00000553618 1266 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.38□□□□□ -1.39
NR1H2P55055 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.38□□□□□ -1.39
NR1H2P55055 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC6.38□□□□□ -1.39
NR1H2P55055 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.38□□□□□ -1.39
NR1H2P55055 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.38□□□□□ -1.39
NR1H2P55055 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.38□□□□□ -1.39
NR1H2P55055 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.38□□□□□ -1.39
NR1H2P55055 AL354696.1-201ENST00000614652 497 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 AC009032.1-201ENST00000617574 431 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.38□□□□□ -1.39
NR1H2P55055 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.38□□□□□ -1.39
NR1H2P55055 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NR1H2P55055 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NR1H2P55055 AC093844.1-201ENST00000514910 1361 ntBASIC6.38□□□□□ -1.39
NR1H2P55055 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
NR1H2P55055 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NR1H2P55055 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
NR1H2P55055 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
NR1H2P55055 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NR1H2P55055 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.38□□□□□ -1.39
NR1H2P55055 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NR1H2P55055 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NR1H2P55055 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.37□□□□□ -1.39
NR1H2P55055 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NR1H2P55055 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NR1H2P55055 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NR1H2P55055 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.37□□□□□ -1.39
NR1H2P55055 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.37□□□□□ -1.39
NR1H2P55055 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms