Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGA1P17096 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGA1P17096 AC068768.2-201ENST00000602352 343 ntBASIC6.56□□□□□ -1.36
HMGA1P17096 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGA1P17096 AC022106.1-201ENST00000612834 766 ntBASIC6.56□□□□□ -1.36
HMGA1P17096 AC004801.6-201ENST00000616571 978 ntBASIC6.56□□□□□ -1.36
HMGA1P17096 AL512652.1-201ENST00000619006 500 ntBASIC6.56□□□□□ -1.36
HMGA1P17096 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HMGA1P17096 ZSWIM5P3-201ENST00000511265 2743 ntBASIC6.56□□□□□ -1.36
HMGA1P17096 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
HMGA1P17096 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
HMGA1P17096 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGA1P17096 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGA1P17096 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGA1P17096 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGA1P17096 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HMGA1P17096 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
HMGA1P17096 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGA1P17096 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGA1P17096 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGA1P17096 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGA1P17096 AC105235.1-201ENST00000623208 1816 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 AC098614.1-202ENST00000634895 1830 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGA1P17096 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
HMGA1P17096 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGA1P17096 AC062029.1-202ENST00000606164 3651 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGA1P17096 SNORA21-201ENST00000362423 132 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 LCN1P2-201ENST00000372030 223 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGA1P17096 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.55□□□□□ -1.36
HMGA1P17096 AC130360.1-201ENST00000425489 1117 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGA1P17096 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGA1P17096 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 AC023194.2-201ENST00000465398 406 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 AC094085.1-201ENST00000468914 584 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 AC090568.1-201ENST00000509499 856 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 RNA5SP434-201ENST00000516647 121 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.55□□□□□ -1.36
HMGA1P17096 AC130365.2-201ENST00000525882 1201 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGA1P17096 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGA1P17096 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGA1P17096 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HMGA1P17096 AC009120.3-201ENST00000563335 499 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 AC067773.1-201ENST00000603284 1094 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 AC073333.2-201ENST00000603589 769 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGA1P17096 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGA1P17096 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGA1P17096 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGA1P17096 AC092821.2-201ENST00000545710 2042 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGA1P17096 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGA1P17096 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGA1P17096 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGA1P17096 GUCY1B2-204ENST00000531898 1979 ntBASIC6.55□□□□□ -1.36
HMGA1P17096 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
HMGA1P17096 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGA1P17096 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.54□□□□□ -1.36
HMGA1P17096 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGA1P17096 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGA1P17096 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HMGA1P17096 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
HMGA1P17096 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGA1P17096 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGA1P17096 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGA1P17096 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGA1P17096 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGA1P17096 AC066692.1-201ENST00000421721 457 ntBASIC6.54□□□□□ -1.36
HMGA1P17096 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
HMGA1P17096 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGA1P17096 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGA1P17096 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.54□□□□□ -1.36
HMGA1P17096 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGA1P17096 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGA1P17096 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGA1P17096 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGA1P17096 CR383658.1-201ENST00000514609 734 ntBASIC6.54□□□□□ -1.36
HMGA1P17096 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGA1P17096 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGA1P17096 AC073916.1-201ENST00000545095 130 ntBASIC6.54□□□□□ -1.36
HMGA1P17096 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGA1P17096 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGA1P17096 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGA1P17096 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGA1P17096 AC092681.3-201ENST00000609463 678 ntBASIC6.54□□□□□ -1.36
HMGA1P17096 RFPL4AP6-201ENST00000616792 846 ntBASIC6.54□□□□□ -1.36
HMGA1P17096 AC073862.4-201ENST00000622982 854 ntBASIC6.54□□□□□ -1.36
HMGA1P17096 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGA1P17096 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
HMGA1P17096 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGA1P17096 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HMGA1P17096 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGA1P17096 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGA1P17096 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGA1P17096 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGA1P17096 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms