Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RN7SKP69-201ENST00000365390 305 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CXCL1P09341 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC4.87□□□□□ -1.63
CXCL1P09341 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 RNA5SP474-201ENST00000391234 90 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 GAPDHP55-201ENST00000423136 803 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 AC073410.1-201ENST00000435125 589 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 ANXA2P2-201ENST00000435128 1020 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 DBIL5P2-201ENST00000443827 253 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 AC090954.1-201ENST00000445502 361 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 RN7SL815P-201ENST00000470970 290 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 AC022415.1-202ENST00000486612 523 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 RN7SL518P-201ENST00000491887 280 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CXCL1P09341 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC4.87□□□□□ -1.63
CXCL1P09341 SCARNA18.2-201ENST00000516882 84 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 OR7E1P-201ENST00000533891 958 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC4.87□□□□□ -1.63
CXCL1P09341 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC4.87□□□□□ -1.63
CXCL1P09341 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC4.87□□□□□ -1.63
CXCL1P09341 SNRPCP20-201ENST00000588011 210 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 AP001120.4-201ENST00000590231 108 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 AC087893.2-201ENST00000623272 255 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 AC073263.3-201ENST00000624449 858 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 RACK1-235ENST00000626067 564 ntTSL 2 BASIC4.87□□□□□ -1.63
CXCL1P09341 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC4.87□□□□□ -1.63
CXCL1P09341 AP000550.3-201ENST00000637734 379 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.87□□□□□ -1.63
CXCL1P09341 AC116667.2-201ENST00000641075 823 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.87□□□□□ -1.63
CXCL1P09341 AC005261.6-201ENST00000623072 1387 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC4.87□□□□□ -1.63
CXCL1P09341 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
CXCL1P09341 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC4.86□□□□□ -1.63
CXCL1P09341 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 AP001029.2-203ENST00000589795 4910 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CXCL1P09341 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CXCL1P09341 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 RNU12-2P-201ENST00000364789 156 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 AL035467.1-201ENST00000403583 686 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC4.86□□□□□ -1.63
CXCL1P09341 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC4.86□□□□□ -1.63
CXCL1P09341 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 HMGN2P27-201ENST00000427352 270 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC4.86□□□□□ -1.63
CXCL1P09341 RPS10P21-201ENST00000430654 475 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 AC003989.1-201ENST00000434569 565 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.86□□□□□ -1.63
CXCL1P09341 MED28P3-201ENST00000444288 531 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 NPM1P19-201ENST00000450070 712 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 VNN3-210ENST00000450865 596 ntTSL 4 BASIC4.86□□□□□ -1.63
CXCL1P09341 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 RN7SL216P-201ENST00000471607 298 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 RN7SL182P-201ENST00000496499 300 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC4.86□□□□□ -1.63
CXCL1P09341 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC4.86□□□□□ -1.63
CXCL1P09341 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.86□□□□□ -1.63
CXCL1P09341 OR8Q1P-201ENST00000526467 655 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 AL162632.2-201ENST00000553933 399 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CXCL1P09341 MIR3189-201ENST00000578735 73 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 AC004890.3-201ENST00000605566 1095 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 AC005277.2-201ENST00000617898 390 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 AC012100.3-201ENST00000624738 575 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 AC079776.5-201ENST00000641920 211 ntBASIC4.86□□□□□ -1.63
CXCL1P09341 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC4.86□□□□□ -1.63
CXCL1P09341 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CXCL1P09341 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms