Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC004076.2-201ENST00000620532 3323 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 BX276092.6-201ENST00000430476 250 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC003989.1-201ENST00000434569 565 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC092106.2-201ENST00000436597 487 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 PHBP4-201ENST00000437447 837 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 BX276092.8-201ENST00000455722 250 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC236972.4-201ENST00000458091 963 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 RN7SL552P-201ENST00000462094 276 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 RN7SL216P-201ENST00000471607 298 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 RN7SL282P-201ENST00000479676 297 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 PSMC1P8-201ENST00000536820 1296 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AL162632.2-201ENST00000553933 399 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC005070.1-201ENST00000603744 365 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC004890.3-201ENST00000605566 1095 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC020656.2-201ENST00000613291 5309 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AC096921.2-201ENST00000561507 1916 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 AL162456.1-201ENST00000634535 2006 ntBASIC5.01□□□□□ -1.61
RBFOX3A6NFN3 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC120036.2-201ENST00000509729 1474 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RBFOX3A6NFN3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5□□□□□ -1.61
RBFOX3A6NFN3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5□□□□□ -1.61
RBFOX3A6NFN3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RBFOX3A6NFN3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC074141.1-201ENST00000588129 2995 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5□□□□□ -1.61
RBFOX3A6NFN3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5□□□□□ -1.61
RBFOX3A6NFN3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RBFOX3A6NFN3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RBFOX3A6NFN3 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5□□□□□ -1.61
RBFOX3A6NFN3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 RNA5SP396-201ENST00000364834 120 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 RN7SKP55-201ENST00000364888 307 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 RNA5SP302-201ENST00000364896 100 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 SNORA51.7-201ENST00000384171 134 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 RNU11-6P-201ENST00000391127 133 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC009299.1-201ENST00000429684 717 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 RPS3AP38-201ENST00000435889 763 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AL139135.2-201ENST00000445040 433 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AL591379.2-201ENST00000450223 397 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 RPLP0P1-201ENST00000457002 361 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC106774.2-201ENST00000510266 406 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 IGKV1D-22-201ENST00000518953 324 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms