Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AC126474.2-201ENST00000623268 1750 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AC034229.2-201ENST00000566945 2508 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 NPM1P14-201ENST00000343743 866 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 RNA5SP321-201ENST00000362722 111 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AL451046.1-201ENST00000406097 534 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AL590635.1-201ENST00000406314 586 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AHCYP8-201ENST00000425108 209 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AC092646.1-201ENST00000427142 901 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AL355355.1-201ENST00000442900 793 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 CCNJP2-201ENST00000457810 1163 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AC236972.4-201ENST00000458091 963 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 RPSAP24-201ENST00000461543 873 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 RN7SL165P-201ENST00000477476 291 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 NPM1P21-201ENST00000513394 762 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AC137549.1-201ENST00000514243 533 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AC090115.2-201ENST00000548060 883 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AC010287.1-201ENST00000566916 357 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AP003115.1-201ENST00000569849 463 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AL512430.4-201ENST00000603085 613 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AC027506.1-201ENST00000621395 198 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 AC114546.4-201ENST00000624413 369 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 LINC01616-201ENST00000561816 2280 ntBASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.68□□□□□ -1.5
RHBDD3Q9Y3P4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 TMCC1P1-201ENST00000518897 1980 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC011815.2-201ENST00000618230 2021 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 RNA5SP382-201ENST00000363355 112 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 RNA5SP355-201ENST00000365317 135 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC074375.1-201ENST00000372993 192 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 SNORA70H-201ENST00000383910 135 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 SNORA70J-201ENST00000384182 135 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AL050335.1-201ENST00000396909 869 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 MTND4LP17-201ENST00000414607 293 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC007568.1-201ENST00000422912 471 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 RPL36AP55-201ENST00000454114 305 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC005017.1-201ENST00000482002 490 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AP005639.1-201ENST00000526939 192 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 PPIAP14-201ENST00000577627 496 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC090774.2-201ENST00000584708 322 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 OR7E19P-202ENST00000589942 844 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC091133.5-201ENST00000603088 301 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 BUB1P1-201ENST00000603541 607 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AC025171.4-201ENST00000607250 1047 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AL137000.1-201ENST00000610528 1244 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.67□□□□□ -1.5
RHBDD3Q9Y3P4 AL035425.4-201ENST00000624509 1063 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms