Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 RPS27AP19-201ENST00000597285 458 ntBASIC7.74□□□□□ -1.17
UPF2Q9HAU5 AC245052.7-201ENST00000601161 359 ntBASIC7.74□□□□□ -1.17
UPF2Q9HAU5 AP001267.4-201ENST00000602598 545 ntBASIC7.74□□□□□ -1.17
UPF2Q9HAU5 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 AC019257.2-201ENST00000605539 497 ntBASIC7.74□□□□□ -1.17
UPF2Q9HAU5 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 AC061999.1-201ENST00000624454 177 ntBASIC7.74□□□□□ -1.17
UPF2Q9HAU5 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 OR7E91P-202ENST00000642062 1198 ntBASIC7.74□□□□□ -1.17
UPF2Q9HAU5 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
UPF2Q9HAU5 GUCY1B2-204ENST00000531898 1979 ntBASIC7.73□□□□□ -1.17
UPF2Q9HAU5 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 RNA5SP355-201ENST00000365317 135 ntBASIC7.73□□□□□ -1.17
UPF2Q9HAU5 AC074375.1-201ENST00000372993 192 ntBASIC7.73□□□□□ -1.17
UPF2Q9HAU5 AL096800.1-201ENST00000405326 893 ntBASIC7.73□□□□□ -1.17
UPF2Q9HAU5 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 RN7SL868P-201ENST00000485915 303 ntBASIC7.73□□□□□ -1.17
UPF2Q9HAU5 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.73□□□□□ -1.17
UPF2Q9HAU5 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 HNRNPCP1-201ENST00000556181 766 ntBASIC7.73□□□□□ -1.17
UPF2Q9HAU5 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 GLYATL1P2-202ENST00000588046 902 ntBASIC7.73□□□□□ -1.17
UPF2Q9HAU5 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 AC069234.4-201ENST00000621276 412 ntBASIC7.73□□□□□ -1.17
UPF2Q9HAU5 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 AC084782.1-201ENST00000564401 2465 ntBASIC7.73□□□□□ -1.17
UPF2Q9HAU5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
UPF2Q9HAU5 OFD1P17-201ENST00000437639 3018 ntBASIC7.73□□□□□ -1.17
UPF2Q9HAU5 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AC096921.2-201ENST00000561507 1916 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AC022164.1-201ENST00000568767 2673 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 RNA5SP152-201ENST00000365184 110 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 MIR187-201ENST00000385062 109 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AL079341.1-201ENST00000404701 1207 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 RN7SKP30-201ENST00000411373 334 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 RANP6-201ENST00000413691 644 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AL139184.1-202ENST00000422303 222 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AC021876.1-201ENST00000425959 359 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AC009362.1-201ENST00000427253 406 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 PHBP4-201ENST00000437447 837 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AL451063.1-201ENST00000450164 1133 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AC097460.2-201ENST00000511857 741 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 MIR3189-201ENST00000578735 73 ntBASIC7.72□□□□□ -1.17
UPF2Q9HAU5 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.72□□□□□ -1.17
UPF2Q9HAU5 AC024085.1-201ENST00000604299 432 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms