Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 MTND4P21-201ENST00000453886 1357 ntBASIC7.08□□□□□ -1.28
CDK5RAP1Q96SZ6 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC079248.1-201ENST00000427568 1546 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 FDPSP5-201ENST00000399474 1057 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AL357078.2-201ENST00000416486 427 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 RPEP4-201ENST00000437636 602 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 RBMY2AP-201ENST00000445405 1157 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 RPL23AP28-201ENST00000448062 470 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 RBMY2CP-201ENST00000448575 1157 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AL121578.2-201ENST00000448797 447 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 RBMY2DP-202ENST00000448881 1157 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 RN7SL83P-201ENST00000468131 297 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC021074.2-201ENST00000468434 172 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 RN7SL70P-201ENST00000478322 302 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 RPL7AP23-201ENST00000482625 776 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 SNRPCP11-201ENST00000492453 205 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 MRPL57P6-201ENST00000506570 309 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC095057.1-201ENST00000507583 168 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 OR51A1P-201ENST00000511110 946 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC140063.1-201ENST00000541343 259 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 ANP32BP1-202ENST00000568553 737 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 ELOCP35-201ENST00000604289 336 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC244100.4-201ENST00000617747 388 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 MIR6849-201ENST00000618543 69 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC006328.2-201ENST00000623198 397 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC005514.1-201ENST00000623521 208 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AC012005.2-201ENST00000624333 397 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 SNORA16A-202ENST00000628458 135 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 MAPK10-365ENST00000641902 3825 ntBASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CDK5RAP1Q96SZ6 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 OR52B5P-204ENST00000641744 3467 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 AC067942.1-201ENST00000488045 1493 ntBASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 METTL5-202ENST00000308099 629 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CDK5RAP1Q96SZ6 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms