Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC012123.2-201ENST00000485809 248 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 GAPDHP38-201ENST00000503632 1002 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 SNX18P23-201ENST00000510867 677 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 NPM1P21-201ENST00000513394 762 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 DCAF13P2-201ENST00000514188 555 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 RNA5SP318-201ENST00000516352 92 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AP001803.1-201ENST00000525668 147 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 OR5M4P-201ENST00000529436 925 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 EIF4A3P1-201ENST00000578499 647 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 MIR4433B-201ENST00000581329 102 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AL356986.1-201ENST00000604085 341 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 OR51C1P-201ENST00000608504 942 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AC073263.3-201ENST00000624449 858 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AC017037.4-201ENST00000624526 826 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AC000095.2-202ENST00000637415 154 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 PCAT14-202ENST00000627127 3935 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC005261.6-201ENST00000623072 1387 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC092070.2-203ENST00000598377 3644 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 RNU12-2P-201ENST00000364789 156 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 NRIR-202ENST00000414795 506 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC092066.1-201ENST00000425131 317 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 PRPS1P2-201ENST00000430496 937 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 SUMO2P8-201ENST00000434672 286 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 RN7SL654P-201ENST00000479178 292 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 RN7SL282P-201ENST00000479676 297 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC092824.1-201ENST00000483524 576 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 DCN-209ENST00000546745 1026 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 BMS1P8-201ENST00000565049 1178 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC233702.7-202ENST00000582941 211 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 BOLA2P1-201ENST00000584794 232 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 SNRPCP20-201ENST00000588011 210 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 BUB1P1-201ENST00000603541 607 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AC005070.2-201ENST00000604391 260 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AL132640.3-201ENST00000630473 177 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC4.81□□□□□ -1.64
AP1S3Q96PC3 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.81□□□□□ -1.64
AP1S3Q96PC3 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms