Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 MIR3908-201ENST00000579798 126 ntBASIC6.77□□□□□ -1.33
LMO3Q8TAP4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 WBP11P1-201ENST00000562560 1931 ntBASIC6.77□□□□□ -1.33
LMO3Q8TAP4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LMO3Q8TAP4 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 CASC19-246ENST00000641625 1606 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 SNORA64.3-201ENST00000365647 134 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 LCN1P2-201ENST00000372030 223 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 RNA5SP198-201ENST00000410376 127 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 RNA5SP251-201ENST00000410614 137 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 AC112492.2-201ENST00000432774 1030 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 EMC3-AS1-205ENST00000438698 534 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 RPL12P49-201ENST00000441100 121 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 OR4D12P-201ENST00000509361 911 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 RPA2P3-201ENST00000533268 770 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 AP001858.2-201ENST00000536213 601 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 AC010998.3-201ENST00000613871 631 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.76□□□□□ -1.33
LMO3Q8TAP4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
LMO3Q8TAP4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.75□□□□□ -1.33
LMO3Q8TAP4 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 AC094019.1-201ENST00000434678 472 ntBASIC6.75□□□□□ -1.33
LMO3Q8TAP4 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 SOCS5P1-201ENST00000440415 949 ntBASIC6.75□□□□□ -1.33
LMO3Q8TAP4 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 AC093816.1-201ENST00000515076 913 ntBASIC6.75□□□□□ -1.33
LMO3Q8TAP4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 SNORA74.1-201ENST00000516320 180 ntBASIC6.75□□□□□ -1.33
LMO3Q8TAP4 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 RN7SL66P-201ENST00000582099 264 ntBASIC6.75□□□□□ -1.33
LMO3Q8TAP4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 AC012368.3-201ENST00000604190 219 ntBASIC6.75□□□□□ -1.33
LMO3Q8TAP4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LMO3Q8TAP4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms