Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL731532.1-201ENST00000623972 4236 ntBASIC4.36□□□□□ -1.71
SCXQ7RTU7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.36□□□□□ -1.71
SCXQ7RTU7 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SCXQ7RTU7 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
SCXQ7RTU7 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCXQ7RTU7 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC4.36□□□□□ -1.71
SCXQ7RTU7 AC217777.1-201ENST00000570034 1471 ntBASIC4.36□□□□□ -1.71
SCXQ7RTU7 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
SCXQ7RTU7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
SCXQ7RTU7 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
SCXQ7RTU7 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.36□□□□□ -1.71
SCXQ7RTU7 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCXQ7RTU7 AL512329.1-201ENST00000404600 1592 ntBASIC4.36□□□□□ -1.71
SCXQ7RTU7 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SCXQ7RTU7 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SCXQ7RTU7 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC129502.1-201ENST00000623261 1654 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 MAPK10-287ENST00000641217 3037 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCXQ7RTU7 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AP002512.4-202ENST00000641599 4530 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCXQ7RTU7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCXQ7RTU7 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SCXQ7RTU7 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 FDPSP5-201ENST00000399474 1057 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 RPL7AP51-201ENST00000422016 760 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 LINC00328-2P-201ENST00000436585 219 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 HBG2-204ENST00000444587 307 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AL121578.2-201ENST00000448797 447 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 NMNAT1P3-201ENST00000457517 888 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 RBMY2HP-201ENST00000457961 720 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 RPS7P10-201ENST00000464254 603 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC090589.1-201ENST00000473109 362 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC116917.1-201ENST00000520558 305 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AP001000.1-201ENST00000526843 742 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 SETP17-201ENST00000534163 817 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC023827.2-201ENST00000566880 1061 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC010463.3-201ENST00000594077 500 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC009955.2-201ENST00000597288 542 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC011500.1-201ENST00000601963 469 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC012175.1-201ENST00000603755 531 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC022905.1-201ENST00000503430 3048 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCXQ7RTU7 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AL121949.2-201ENST00000403446 1548 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SCXQ7RTU7 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCXQ7RTU7 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCXQ7RTU7 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC4.35□□□□□ -1.71
SCXQ7RTU7 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCXQ7RTU7 AC123769.1-201ENST00000530992 3192 ntBASIC4.35□□□□□ -1.71
SCXQ7RTU7 RPS2P45-201ENST00000469997 2057 ntBASIC4.34□□□□□ -1.71
SCXQ7RTU7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCXQ7RTU7 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCXQ7RTU7 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SCXQ7RTU7 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SCXQ7RTU7 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SCXQ7RTU7 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SCXQ7RTU7 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SCXQ7RTU7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms