Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPS16P9-201ENST00000477220 427 ntBASIC7.11□□□□□ -1.27
TPM4P67936 RN7SL37P-201ENST00000490461 307 ntBASIC7.11□□□□□ -1.27
TPM4P67936 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.11□□□□□ -1.27
TPM4P67936 RPL5P14-201ENST00000494197 878 ntBASIC7.11□□□□□ -1.27
TPM4P67936 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC7.11□□□□□ -1.27
TPM4P67936 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.11□□□□□ -1.27
TPM4P67936 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.11□□□□□ -1.27
TPM4P67936 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.11□□□□□ -1.27
TPM4P67936 SCARNA5-201ENST00000516201 276 ntBASIC7.11□□□□□ -1.27
TPM4P67936 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.11□□□□□ -1.27
TPM4P67936 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC7.11□□□□□ -1.27
TPM4P67936 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.11□□□□□ -1.27
TPM4P67936 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.11□□□□□ -1.27
TPM4P67936 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.11□□□□□ -1.27
TPM4P67936 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.11□□□□□ -1.27
TPM4P67936 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.11□□□□□ -1.27
TPM4P67936 AC005858.3-201ENST00000624756 589 ntBASIC7.11□□□□□ -1.27
TPM4P67936 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.11□□□□□ -1.27
TPM4P67936 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
TPM4P67936 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TPM4P67936 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TPM4P67936 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
TPM4P67936 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TPM4P67936 MAPK10-287ENST00000641217 3037 ntBASIC7.11□□□□□ -1.27
TPM4P67936 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM4P67936 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.1□□□□□ -1.27
TPM4P67936 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM4P67936 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TPM4P67936 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TPM4P67936 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TPM4P67936 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.1□□□□□ -1.27
TPM4P67936 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM4P67936 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.1□□□□□ -1.27
TPM4P67936 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM4P67936 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM4P67936 AL662791.3-201ENST00000413771 776 ntBASIC7.1□□□□□ -1.27
TPM4P67936 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM4P67936 ETF1P1-206ENST00000427296 984 ntBASIC7.1□□□□□ -1.27
TPM4P67936 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TPM4P67936 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM4P67936 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.1□□□□□ -1.27
TPM4P67936 GAPDHP33-201ENST00000443168 1013 ntBASIC7.1□□□□□ -1.27
TPM4P67936 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7.1□□□□□ -1.27
TPM4P67936 UBBP5-201ENST00000446970 266 ntBASIC7.1□□□□□ -1.27
TPM4P67936 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM4P67936 VPS25P1-201ENST00000455691 508 ntBASIC7.1□□□□□ -1.27
TPM4P67936 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.1□□□□□ -1.27
TPM4P67936 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC7.1□□□□□ -1.27
TPM4P67936 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM4P67936 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TPM4P67936 COX6B1P4-201ENST00000519826 484 ntBASIC7.1□□□□□ -1.27
TPM4P67936 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM4P67936 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM4P67936 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM4P67936 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.1□□□□□ -1.27
TPM4P67936 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.1□□□□□ -1.27
TPM4P67936 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.1□□□□□ -1.27
TPM4P67936 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.1□□□□□ -1.27
TPM4P67936 AC090616.1-201ENST00000583895 447 ntBASIC7.1□□□□□ -1.27
TPM4P67936 EXOSC3P2-201ENST00000594464 497 ntBASIC7.1□□□□□ -1.27
TPM4P67936 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.1□□□□□ -1.27
TPM4P67936 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.1□□□□□ -1.27
TPM4P67936 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.1□□□□□ -1.27
TPM4P67936 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.1□□□□□ -1.27
TPM4P67936 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
TPM4P67936 AC100810.3-201ENST00000633189 2240 ntBASIC7.1□□□□□ -1.27
TPM4P67936 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TPM4P67936 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TPM4P67936 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.1□□□□□ -1.27
TPM4P67936 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TPM4P67936 AC092724.1-201ENST00000624623 3397 ntBASIC7.1□□□□□ -1.27
TPM4P67936 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TPM4P67936 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TPM4P67936 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TPM4P67936 ZNF101P1-201ENST00000435701 1720 ntBASIC7.1□□□□□ -1.27
TPM4P67936 RBPJP6-201ENST00000411556 1431 ntBASIC7.1□□□□□ -1.27
TPM4P67936 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TPM4P67936 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.09□□□□□ -1.27
TPM4P67936 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
TPM4P67936 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TPM4P67936 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.09□□□□□ -1.27
TPM4P67936 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TPM4P67936 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TPM4P67936 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
TPM4P67936 AC092701.1-201ENST00000623627 1551 ntBASIC7.09□□□□□ -1.27
TPM4P67936 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.09□□□□□ -1.27
TPM4P67936 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
TPM4P67936 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
TPM4P67936 GNG5P2-201ENST00000372054 207 ntBASIC7.09□□□□□ -1.27
TPM4P67936 RNA5SP35-201ENST00000391257 129 ntBASIC7.09□□□□□ -1.27
TPM4P67936 AL391419.1-201ENST00000398901 1275 ntBASIC7.09□□□□□ -1.27
TPM4P67936 RN7SKP151-201ENST00000410230 316 ntBASIC7.09□□□□□ -1.27
TPM4P67936 AL359633.1-201ENST00000421403 310 ntBASIC7.09□□□□□ -1.27
TPM4P67936 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.09□□□□□ -1.27
TPM4P67936 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.09□□□□□ -1.27
TPM4P67936 AC000089.1-201ENST00000424559 801 ntBASIC7.09□□□□□ -1.27
TPM4P67936 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.09□□□□□ -1.27
TPM4P67936 ATP5LP4-201ENST00000434169 307 ntBASIC7.09□□□□□ -1.27
TPM4P67936 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC7.09□□□□□ -1.27
TPM4P67936 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms