Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SUMO3P55854 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
SUMO3P55854 SPATA31C2-201ENST00000324915 3777 ntBASIC6.28□□□□□ -1.4
SUMO3P55854 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
SUMO3P55854 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
SUMO3P55854 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 AP002364.1-201ENST00000623330 3386 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC009135.2-201ENST00000624136 1768 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SUMO3P55854 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SUMO3P55854 MIR16-2-201ENST00000362117 81 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SUMO3P55854 MIR541-201ENST00000401360 84 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 RPLP1P10-201ENST00000413972 339 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.27□□□□□ -1.41
SUMO3P55854 AC011242.1-201ENST00000433596 1158 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 PHB2P1-201ENST00000434943 890 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC027124.1-201ENST00000440852 466 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.27□□□□□ -1.41
SUMO3P55854 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.27□□□□□ -1.41
SUMO3P55854 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 ST13P21-201ENST00000453250 1098 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.27□□□□□ -1.41
SUMO3P55854 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 BZW1P1-201ENST00000454901 1240 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 AC115223.1-201ENST00000466377 870 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC108729.1-201ENST00000487812 947 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 AC021146.7-201ENST00000509604 775 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 AC011352.2-201ENST00000514574 1016 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC022826.1-201ENST00000519383 805 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.27□□□□□ -1.41
SUMO3P55854 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.27□□□□□ -1.41
SUMO3P55854 AL135978.1-201ENST00000553618 1266 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.27□□□□□ -1.41
SUMO3P55854 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.27□□□□□ -1.41
SUMO3P55854 AC020914.7-201ENST00000594477 545 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 AF230666.2-201ENST00000602328 725 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC034236.3-201ENST00000605999 461 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 RNU6-84P-201ENST00000607737 102 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC004801.6-201ENST00000616571 978 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AP003108.4-201ENST00000623917 878 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC004808.1-201ENST00000627671 721 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 OR4G3P-201ENST00000633500 913 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SUMO3P55854 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 AC092725.2-201ENST00000567658 1389 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 AC010168.2-201ENST00000562691 5428 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 AC067942.1-201ENST00000488045 1493 ntBASIC6.27□□□□□ -1.41
SUMO3P55854 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SUMO3P55854 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.27□□□□□ -1.41
SUMO3P55854 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.27□□□□□ -1.41
SUMO3P55854 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.26□□□□□ -1.41
SUMO3P55854 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SUMO3P55854 AC119674.1-204ENST00000641348 1343 ntBASIC6.26□□□□□ -1.41
SUMO3P55854 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.26□□□□□ -1.41
SUMO3P55854 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms