Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.37□□□□□ -1.23
HMGCS2P54868 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGCS2P54868 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.37□□□□□ -1.23
HMGCS2P54868 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.37□□□□□ -1.23
HMGCS2P54868 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.37□□□□□ -1.23
HMGCS2P54868 AC068768.2-201ENST00000602352 343 ntBASIC7.37□□□□□ -1.23
HMGCS2P54868 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.37□□□□□ -1.23
HMGCS2P54868 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.37□□□□□ -1.23
HMGCS2P54868 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC7.37□□□□□ -1.23
HMGCS2P54868 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGCS2P54868 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
HMGCS2P54868 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC7.37□□□□□ -1.23
HMGCS2P54868 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.37□□□□□ -1.23
HMGCS2P54868 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HMGCS2P54868 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.37□□□□□ -1.23
HMGCS2P54868 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.37□□□□□ -1.23
HMGCS2P54868 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGCS2P54868 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.36□□□□□ -1.23
HMGCS2P54868 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HMGCS2P54868 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HMGCS2P54868 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HMGCS2P54868 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.36□□□□□ -1.23
HMGCS2P54868 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.36□□□□□ -1.23
HMGCS2P54868 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
HMGCS2P54868 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.36□□□□□ -1.23
HMGCS2P54868 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
HMGCS2P54868 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
HMGCS2P54868 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.36□□□□□ -1.23
HMGCS2P54868 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.36□□□□□ -1.23
HMGCS2P54868 CST12P-201ENST00000457644 362 ntBASIC7.36□□□□□ -1.23
HMGCS2P54868 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
HMGCS2P54868 AC106872.4-201ENST00000510050 523 ntBASIC7.36□□□□□ -1.23
HMGCS2P54868 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.36□□□□□ -1.23
HMGCS2P54868 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.36□□□□□ -1.23
HMGCS2P54868 OR4A13P-201ENST00000529316 942 ntBASIC7.36□□□□□ -1.23
HMGCS2P54868 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.36□□□□□ -1.23
HMGCS2P54868 AC068305.2-201ENST00000550567 1205 ntBASIC7.36□□□□□ -1.23
HMGCS2P54868 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.36□□□□□ -1.23
HMGCS2P54868 AC007448.1-201ENST00000582714 234 ntBASIC7.36□□□□□ -1.23
HMGCS2P54868 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.36□□□□□ -1.23
HMGCS2P54868 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.36□□□□□ -1.23
HMGCS2P54868 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HMGCS2P54868 AP001823.1-201ENST00000604056 1003 ntBASIC7.36□□□□□ -1.23
HMGCS2P54868 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HMGCS2P54868 BX323046.1-201ENST00000610145 535 ntBASIC7.36□□□□□ -1.23
HMGCS2P54868 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.36□□□□□ -1.23
HMGCS2P54868 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HMGCS2P54868 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.36□□□□□ -1.23
HMGCS2P54868 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
HMGCS2P54868 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HMGCS2P54868 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HMGCS2P54868 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HMGCS2P54868 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
HMGCS2P54868 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.36□□□□□ -1.23
HMGCS2P54868 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HMGCS2P54868 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HMGCS2P54868 AL136531.3-201ENST00000624378 3658 ntBASIC7.36□□□□□ -1.23
HMGCS2P54868 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
HMGCS2P54868 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
HMGCS2P54868 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.35□□□□□ -1.23
HMGCS2P54868 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGCS2P54868 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGCS2P54868 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.35□□□□□ -1.23
HMGCS2P54868 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.35□□□□□ -1.23
HMGCS2P54868 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGCS2P54868 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGCS2P54868 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGCS2P54868 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGCS2P54868 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.35□□□□□ -1.23
HMGCS2P54868 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.35□□□□□ -1.23
HMGCS2P54868 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGCS2P54868 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGCS2P54868 CASC19-238ENST00000641523 1558 ntBASIC7.35□□□□□ -1.23
HMGCS2P54868 RNA5SP477-201ENST00000362639 119 ntBASIC7.35□□□□□ -1.23
HMGCS2P54868 SNORA51.1-201ENST00000363243 140 ntBASIC7.35□□□□□ -1.23
HMGCS2P54868 RN7SKP81-201ENST00000365603 331 ntBASIC7.35□□□□□ -1.23
HMGCS2P54868 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGCS2P54868 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.35□□□□□ -1.23
HMGCS2P54868 CYCSP52-201ENST00000422857 310 ntBASIC7.35□□□□□ -1.23
HMGCS2P54868 AC130360.1-201ENST00000425489 1117 ntBASIC7.35□□□□□ -1.23
HMGCS2P54868 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGCS2P54868 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGCS2P54868 AC022826.1-201ENST00000519383 805 ntBASIC7.35□□□□□ -1.23
HMGCS2P54868 AC130365.2-201ENST00000525882 1201 ntBASIC7.35□□□□□ -1.23
HMGCS2P54868 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
HMGCS2P54868 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGCS2P54868 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGCS2P54868 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGCS2P54868 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGCS2P54868 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGCS2P54868 AC011445.2-201ENST00000599274 173 ntBASIC7.35□□□□□ -1.23
HMGCS2P54868 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGCS2P54868 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGCS2P54868 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGCS2P54868 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGCS2P54868 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGCS2P54868 AC062022.1-201ENST00000451026 1684 ntBASIC7.35□□□□□ -1.23
HMGCS2P54868 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGCS2P54868 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGCS2P54868 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms