Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MIR541-201ENST00000401360 84 ntBASIC6.99□□□□□ -1.29
NEK3P51956 RN7SKP91-201ENST00000410852 288 ntBASIC6.99□□□□□ -1.29
NEK3P51956 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.99□□□□□ -1.29
NEK3P51956 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.99□□□□□ -1.29
NEK3P51956 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.99□□□□□ -1.29
NEK3P51956 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.99□□□□□ -1.29
NEK3P51956 AL022324.2-201ENST00000434827 780 ntBASIC6.99□□□□□ -1.29
NEK3P51956 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.99□□□□□ -1.29
NEK3P51956 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.99□□□□□ -1.29
NEK3P51956 AC073476.1-201ENST00000452854 407 ntBASIC6.99□□□□□ -1.29
NEK3P51956 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.99□□□□□ -1.29
NEK3P51956 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.99□□□□□ -1.29
NEK3P51956 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.99□□□□□ -1.29
NEK3P51956 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.99□□□□□ -1.29
NEK3P51956 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 MRPS5P3-201ENST00000515577 166 ntBASIC6.99□□□□□ -1.29
NEK3P51956 AC073581.1-201ENST00000519036 575 ntBASIC6.99□□□□□ -1.29
NEK3P51956 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.99□□□□□ -1.29
NEK3P51956 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.99□□□□□ -1.29
NEK3P51956 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.99□□□□□ -1.29
NEK3P51956 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.99□□□□□ -1.29
NEK3P51956 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.99□□□□□ -1.29
NEK3P51956 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.99□□□□□ -1.29
NEK3P51956 MIR378C-201ENST00000578683 81 ntBASIC6.99□□□□□ -1.29
NEK3P51956 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.99□□□□□ -1.29
NEK3P51956 MIMT1-201ENST00000597105 1050 ntBASIC6.99□□□□□ -1.29
NEK3P51956 RPL21P136-201ENST00000605378 396 ntBASIC6.99□□□□□ -1.29
NEK3P51956 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.99□□□□□ -1.29
NEK3P51956 AC012213.4-201ENST00000606457 354 ntBASIC6.99□□□□□ -1.29
NEK3P51956 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.99□□□□□ -1.29
NEK3P51956 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 U1.34-201ENST00000618578 162 ntBASIC6.99□□□□□ -1.29
NEK3P51956 AC241377.1-201ENST00000619797 406 ntBASIC6.99□□□□□ -1.29
NEK3P51956 AL138693.1-201ENST00000622219 129 ntBASIC6.99□□□□□ -1.29
NEK3P51956 AC120057.5-201ENST00000623840 154 ntBASIC6.99□□□□□ -1.29
NEK3P51956 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.99□□□□□ -1.29
NEK3P51956 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.99□□□□□ -1.29
NEK3P51956 CCAT2-201ENST00000630920 1752 ntBASIC6.99□□□□□ -1.29
NEK3P51956 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 AC129502.1-201ENST00000623261 1654 ntBASIC6.99□□□□□ -1.29
NEK3P51956 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
NEK3P51956 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
NEK3P51956 CCDC150P1-201ENST00000537123 2215 ntBASIC6.99□□□□□ -1.29
NEK3P51956 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 AL391261.1-201ENST00000555712 1479 ntBASIC6.98□□□□□ -1.29
NEK3P51956 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 AC022905.1-201ENST00000503430 3048 ntBASIC6.98□□□□□ -1.29
NEK3P51956 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
NEK3P51956 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 OLMALINC-203ENST00000641087 3779 ntBASIC6.98□□□□□ -1.29
NEK3P51956 AC011503.2-201ENST00000594230 1500 ntBASIC6.98□□□□□ -1.29
NEK3P51956 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
NEK3P51956 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 RNA5SP152-201ENST00000365184 110 ntBASIC6.98□□□□□ -1.29
NEK3P51956 OR13C3-201ENST00000374781 1108 ntBASIC6.98□□□□□ -1.29
NEK3P51956 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.98□□□□□ -1.29
NEK3P51956 AL079341.1-201ENST00000404701 1207 ntBASIC6.98□□□□□ -1.29
NEK3P51956 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.98□□□□□ -1.29
NEK3P51956 AL713922.1-201ENST00000416477 747 ntBASIC6.98□□□□□ -1.29
NEK3P51956 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.98□□□□□ -1.29
NEK3P51956 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.98□□□□□ -1.29
NEK3P51956 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.98□□□□□ -1.29
NEK3P51956 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.98□□□□□ -1.29
NEK3P51956 PSMA6P2-201ENST00000457574 686 ntBASIC6.98□□□□□ -1.29
NEK3P51956 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.98□□□□□ -1.29
NEK3P51956 RPL37AP8-201ENST00000494116 276 ntBASIC6.98□□□□□ -1.29
NEK3P51956 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.98□□□□□ -1.29
NEK3P51956 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.98□□□□□ -1.29
NEK3P51956 MTCYBP44-201ENST00000514835 823 ntBASIC6.98□□□□□ -1.29
NEK3P51956 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.98□□□□□ -1.29
NEK3P51956 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.98□□□□□ -1.29
NEK3P51956 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.98□□□□□ -1.29
NEK3P51956 AC008147.3-201ENST00000548666 354 ntBASIC6.98□□□□□ -1.29
NEK3P51956 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.98□□□□□ -1.29
NEK3P51956 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
NEK3P51956 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.98□□□□□ -1.29
NEK3P51956 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.98□□□□□ -1.29
NEK3P51956 AC040174.2-201ENST00000602701 465 ntBASIC6.98□□□□□ -1.29
NEK3P51956 AC007255.2-201ENST00000604053 631 ntBASIC6.98□□□□□ -1.29
NEK3P51956 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.98□□□□□ -1.29
NEK3P51956 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 AC017037.4-201ENST00000624526 826 ntBASIC6.98□□□□□ -1.29
NEK3P51956 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
NEK3P51956 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 AP002800.1-201ENST00000624982 2225 ntBASIC6.98□□□□□ -1.29
NEK3P51956 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
NEK3P51956 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms