Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.81□□□□□ -1.48
FREM3P0C091 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 RNA5SP431-201ENST00000410312 120 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 VN1R20P-201ENST00000425215 966 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 AL645939.3-201ENST00000435408 225 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 POU5F1P5-201ENST00000445059 658 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 RPL23AP68-201ENST00000480924 445 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.81□□□□□ -1.48
FREM3P0C091 AC022206.1-201ENST00000495947 347 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 AC091965.3-201ENST00000506236 208 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.81□□□□□ -1.48
FREM3P0C091 AC005363.1-201ENST00000530779 351 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.81□□□□□ -1.48
FREM3P0C091 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.81□□□□□ -1.48
FREM3P0C091 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 AL162377.2-201ENST00000624532 337 ntBASIC5.81□□□□□ -1.48
FREM3P0C091 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.81□□□□□ -1.48
FREM3P0C091 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC5.81□□□□□ -1.48
FREM3P0C091 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.81□□□□□ -1.48
FREM3P0C091 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.81□□□□□ -1.48
FREM3P0C091 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC5.81□□□□□ -1.48
FREM3P0C091 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.81□□□□□ -1.48
FREM3P0C091 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FREM3P0C091 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC5.8□□□□□ -1.48
FREM3P0C091 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
FREM3P0C091 PARP4P1-201ENST00000435945 2337 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.8□□□□□ -1.48
FREM3P0C091 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.8□□□□□ -1.48
FREM3P0C091 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 AP003175.1-201ENST00000641383 6658 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.8□□□□□ -1.48
FREM3P0C091 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.8□□□□□ -1.48
FREM3P0C091 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.8□□□□□ -1.48
FREM3P0C091 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.8□□□□□ -1.48
FREM3P0C091 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.8□□□□□ -1.48
FREM3P0C091 RPS27P20-201ENST00000492051 246 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 AP002453.1-201ENST00000492327 668 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.8□□□□□ -1.48
FREM3P0C091 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.8□□□□□ -1.48
FREM3P0C091 AC026898.1-201ENST00000586404 571 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.8□□□□□ -1.48
FREM3P0C091 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
FREM3P0C091 AL359742.1-201ENST00000622497 540 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.8□□□□□ -1.48
FREM3P0C091 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.8□□□□□ -1.48
FREM3P0C091 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
FREM3P0C091 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
FREM3P0C091 ZNF812P-201ENST00000457674 1694 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.8□□□□□ -1.48
FREM3P0C091 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
FREM3P0C091 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.8□□□□□ -1.48
FREM3P0C091 AC092724.1-201ENST00000624623 3397 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
FREM3P0C091 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 AC010624.4-201ENST00000597606 1351 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FREM3P0C091 AL139805.1-201ENST00000407837 289 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.8□□□□□ -1.48
FREM3P0C091 AC002127.1-201ENST00000421305 225 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.8□□□□□ -1.48
FREM3P0C091 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.8□□□□□ -1.48
FREM3P0C091 NPM1P27-201ENST00000502784 830 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.8□□□□□ -1.48
FREM3P0C091 SMIM12P1-201ENST00000603004 274 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 MIR7109-201ENST00000613748 65 ntBASIC5.8□□□□□ -1.48
FREM3P0C091 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.8□□□□□ -1.48
FREM3P0C091 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.8□□□□□ -1.48
FREM3P0C091 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
FREM3P0C091 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC5.79□□□□□ -1.48
FREM3P0C091 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
FREM3P0C091 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.79□□□□□ -1.48
FREM3P0C091 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.79□□□□□ -1.48
FREM3P0C091 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
FREM3P0C091 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms