Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC011447.2-201ENST00000592921 283 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC4.89□□□□□ -1.63
CXCL1P09341 AL356986.1-201ENST00000604085 341 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC4.89□□□□□ -1.63
CXCL1P09341 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CXCL1P09341 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.89□□□□□ -1.63
CXCL1P09341 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.89□□□□□ -1.63
CXCL1P09341 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CXCL1P09341 AP001157.1-201ENST00000550837 2339 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CXCL1P09341 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.88□□□□□ -1.63
CXCL1P09341 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
CXCL1P09341 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL1P09341 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC4.88□□□□□ -1.63
CXCL1P09341 DLEU2L-201ENST00000371086 3555 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.88□□□□□ -1.63
CXCL1P09341 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CXCL1P09341 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 RNA5SP114-201ENST00000363780 113 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL1P09341 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL1P09341 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL1P09341 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL1P09341 UBE2V1P14-201ENST00000415815 558 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 RPS7P12-201ENST00000422385 582 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 AC093107.1-201ENST00000422772 609 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL1P09341 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC4.88□□□□□ -1.63
CXCL1P09341 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL1P09341 AL663074.2-201ENST00000440621 479 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC4.88□□□□□ -1.63
CXCL1P09341 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC4.88□□□□□ -1.63
CXCL1P09341 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 RN7SL308P-201ENST00000464971 297 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 RPSAP48-201ENST00000466509 889 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 AC008620.1-201ENST00000468453 592 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL1P09341 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.88□□□□□ -1.63
CXCL1P09341 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL1P09341 OR5M4P-201ENST00000529436 925 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.88□□□□□ -1.63
CXCL1P09341 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL1P09341 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL1P09341 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 AL049869.4-201ENST00000555669 178 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL1P09341 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC4.88□□□□□ -1.63
CXCL1P09341 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL1P09341 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC4.88□□□□□ -1.63
CXCL1P09341 AC027216.1-201ENST00000577726 685 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 AC010503.3-201ENST00000594355 540 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 AL136139.1-201ENST00000605568 222 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 5S_rRNA.23-201ENST00000612086 102 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 AC243830.3-201ENST00000616810 376 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC4.88□□□□□ -1.63
CXCL1P09341 MRPL57P1-201ENST00000621486 265 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 AC114546.4-201ENST00000624413 369 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC4.88□□□□□ -1.63
CXCL1P09341 AL356585.10-201ENST00000641883 123 ntBASIC4.88□□□□□ -1.63
CXCL1P09341 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL1P09341 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC4.88□□□□□ -1.63
CXCL1P09341 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL1P09341 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CXCL1P09341 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.88□□□□□ -1.63
CXCL1P09341 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
CXCL1P09341 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.87□□□□□ -1.63
CXCL1P09341 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CXCL1P09341 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC4.87□□□□□ -1.63
CXCL1P09341 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
CXCL1P09341 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.87□□□□□ -1.63
CXCL1P09341 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.87□□□□□ -1.63
CXCL1P09341 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CXCL1P09341 AC015689.2-201ENST00000528172 1738 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CXCL1P09341 DNM1P47-203ENST00000571780 12667 ntBASIC4.87□□□□□ -1.63
CXCL1P09341 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
CXCL1P09341 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 257.7 ms