Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC66A2RUB6 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC66A2RUB6 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.45□□□□□ -1.22
CCDC66A2RUB6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC106754.1-201ENST00000562632 1513 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 RNU2-5P-201ENST00000410533 180 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC017104.2-201ENST00000417000 321 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 RPL7AP14-201ENST00000424041 802 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 MTCO2P1-201ENST00000424648 477 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC073072.2-201ENST00000447425 348 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 RPL7P14-201ENST00000449851 741 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AL591379.2-201ENST00000450223 397 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC018892.2-201ENST00000457656 693 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC135721.2-201ENST00000464237 300 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC068587.2-201ENST00000478386 781 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 RN7SL152P-201ENST00000484176 298 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 OR9L1P-201ENST00000529493 933 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AP000619.2-201ENST00000546014 969 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC111186.1-201ENST00000604684 130 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AC099654.8-201ENST00000637757 681 ntBASIC7.44□□□□□ -1.22
CCDC66A2RUB6 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC66A2RUB6 AL136531.3-201ENST00000624378 3658 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC013488.1-201ENST00000526618 1838 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 RNA5SP172-201ENST00000365061 118 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 ARMCX7P-201ENST00000372828 562 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 RPL12P1-201ENST00000374520 498 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC009237.9-201ENST00000414800 347 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 PPIAP30-201ENST00000415473 519 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 MTND4P24-201ENST00000424002 397 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 NPM1P25-201ENST00000429734 854 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AL512637.2-201ENST00000431287 1256 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC007000.2-201ENST00000442564 487 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 RN7SL149P-201ENST00000465197 281 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 RPS3AP6-201ENST00000484430 795 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 RN7SL775P-201ENST00000498361 336 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC093534.1-201ENST00000504977 132 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 ENPP7P3-201ENST00000509123 241 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC068631.3-201ENST00000538831 225 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC016144.1-201ENST00000548175 1087 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 COX6CP11-201ENST00000555293 229 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC243312.1-201ENST00000570582 275 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms