Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AL121657.1-201ENST00000327215 531 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 RNU4-91P-201ENST00000364778 135 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC096664.1-201ENST00000393996 778 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 OOSP1-201ENST00000398992 1270 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AL096711.1-201ENST00000404780 554 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 CIR1P3-201ENST00000405137 479 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 RPL7P8-201ENST00000411964 730 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC009237.5-201ENST00000414271 501 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 TMSB10P1-201ENST00000415070 132 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AL390840.1-201ENST00000420303 988 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 DNAJC19P4-201ENST00000440115 345 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 MTCYBP42-201ENST00000444653 1130 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 RPS20P24-201ENST00000457473 361 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 CCNJP2-201ENST00000457810 1163 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 RN7SL403P-201ENST00000481783 305 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 RN7SL505P-201ENST00000482644 293 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 RPL17P37-201ENST00000490729 548 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC023794.3-204ENST00000510754 236 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 Y_RNA.701-201ENST00000516812 110 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 OR4C7P-201ENST00000533375 919 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC116553.2-201ENST00000564203 463 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 TUBAP4-201ENST00000569261 416 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC136944.5-201ENST00000573021 151 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 BPTFP1-201ENST00000579209 492 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC022432.1-201ENST00000595739 310 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC016876.3-201ENST00000610459 426 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC107075.1-201ENST00000613695 314 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC239600.2-201ENST00000619615 1165 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 KRTAP7-1-201ENST00000621162 721 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC079684.1-201ENST00000621405 437 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC024580.1-201ENST00000623020 674 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 RHOXF1P2-201ENST00000635431 502 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC003985.2-201ENST00000562268 1669 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 KYNUP2-201ENST00000582280 1329 ntBASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AC138409.1-201ENST00000505001 3598 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 LRRC37A6P-202ENST00000448648 5444 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AC127459.1-201ENST00000563129 2768 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 U3.34-201ENST00000408198 212 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 RN7SKP285-201ENST00000410137 318 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AC097358.1-201ENST00000438827 582 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 BMS1P10-201ENST00000443754 1120 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AL137845.2-201ENST00000444292 988 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AC007677.1-201ENST00000445757 515 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 KATNBL1P6-201ENST00000453433 915 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 RPL7P32-201ENST00000457119 744 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 RPSAP39-201ENST00000467439 883 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 HSD3BP4-201ENST00000511509 1120 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 RN7SKP197-201ENST00000517077 297 ntBASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC7.97□□□□□ -1.13
CUEDC1Q9NWM3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms