Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 BX679664.2-201ENST00000439282 283 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFT1Q96AA3 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 AP000926.3-201ENST00000497201 299 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 AC083906.1-201ENST00000509298 406 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 NPM1P21-201ENST00000513394 762 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 RNU6-1334P-201ENST00000516032 105 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFT1Q96AA3 SSU72P6-201ENST00000532644 488 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 AC084033.1-201ENST00000550830 633 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 COX6CP16-201ENST00000603667 216 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 AL035417.2-201ENST00000603887 796 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 AC083964.1-201ENST00000607549 630 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 AC004656.1-201ENST00000568479 4951 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFT1Q96AA3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFT1Q96AA3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFT1Q96AA3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFT1Q96AA3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFT1Q96AA3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFT1Q96AA3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFT1Q96AA3 AL512353.3-201ENST00000417517 1326 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFT1Q96AA3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFT1Q96AA3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFT1Q96AA3 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 AL050335.1-201ENST00000396909 869 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 MIR1231-201ENST00000408101 92 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFT1Q96AA3 RN7SKP137-201ENST00000411074 307 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 AL359633.1-201ENST00000421403 310 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 PAICSP2-201ENST00000429118 1150 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 BX005266.3-201ENST00000443013 1075 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 ST13P21-201ENST00000453250 1098 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFT1Q96AA3 PPP1R2P6-201ENST00000478565 588 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 RN7SL518P-201ENST00000491887 280 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 RPS26P24-201ENST00000497656 331 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 AC093815.1-201ENST00000508637 280 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 MTCYBP44-201ENST00000514835 823 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 RN7SKP11-201ENST00000517018 287 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 IGKV2-19-201ENST00000518132 283 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 BCAS2P1-201ENST00000528022 632 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFT1Q96AA3 AP003115.1-201ENST00000569849 463 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 EXOSC3P2-201ENST00000594464 497 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFT1Q96AA3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFT1Q96AA3 AC093844.1-201ENST00000514910 1361 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 AL731532.1-201ENST00000623972 4236 ntBASIC5.78□□□□□ -1.48
RFT1Q96AA3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RFT1Q96AA3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms