Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 DEFA11P-201ENST00000446470 261 ntBASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 AC009120.3-201ENST00000563335 499 ntBASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL22A1Q8NFW1 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 AC007485.2-201ENST00000623493 1667 ntBASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 AC110373.1-201ENST00000505994 3505 ntBASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 SNORA43.1-201ENST00000364863 140 ntBASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 EEF1B2P6-201ENST00000445713 673 ntBASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 ASB8-215ENST00000540782 659 ntTSL 3 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 AP001496.3-201ENST00000580230 913 ntBASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 AL445649.1-201ENST00000615941 691 ntBASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
COL22A1Q8NFW1 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 MAPK10-344ENST00000641718 3746 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 RNA5SP375-201ENST00000362975 119 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 HMGB1P20-201ENST00000402555 677 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 RN7SKP59-201ENST00000410520 314 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 RN7SL561P-201ENST00000488553 281 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 AC105420.1-201ENST00000504389 582 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 AC093763.2-201ENST00000505334 1223 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 AL121579.2-201ENST00000555466 590 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 DPPA2P4-201ENST00000563717 878 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 AC027229.1-201ENST00000583887 253 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 FO393422.1-201ENST00000603908 708 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 AC005393.1-201ENST00000617916 584 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 MIR193BHG-214ENST00000641765 509 ntBASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
COL22A1Q8NFW1 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 SPRYD7P1-201ENST00000443861 570 ntBASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 MORF4-201ENST00000447135 971 ntBASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 BX510359.5-201ENST00000515651 304 ntBASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 HMGN2P36-201ENST00000529541 409 ntBASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 AC092375.1-201ENST00000550410 637 ntBASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC8.29□□□□□ -1.08
COL22A1Q8NFW1 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms