Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AP005262.1-201ENST00000582646 997 ntBASIC6.88□□□□□ -1.31
ATG4DQ86TL0 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 AC133552.5-201ENST00000604266 540 ntBASIC6.88□□□□□ -1.31
ATG4DQ86TL0 LSM1P2-201ENST00000604911 322 ntBASIC6.88□□□□□ -1.31
ATG4DQ86TL0 AL109918.2-201ENST00000605188 279 ntBASIC6.88□□□□□ -1.31
ATG4DQ86TL0 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 OR6L2P-201ENST00000608207 925 ntBASIC6.88□□□□□ -1.31
ATG4DQ86TL0 AL391903.2-201ENST00000614532 247 ntBASIC6.88□□□□□ -1.31
ATG4DQ86TL0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 AC130456.6-201ENST00000623745 765 ntBASIC6.88□□□□□ -1.31
ATG4DQ86TL0 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 AC073488.2-201ENST00000631903 751 ntBASIC6.88□□□□□ -1.31
ATG4DQ86TL0 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 MAPK10-279ENST00000641157 2449 ntBASIC6.88□□□□□ -1.31
ATG4DQ86TL0 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ATG4DQ86TL0 MFSD8-218ENST00000641186 4448 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 Y_RNA.70-201ENST00000362886 110 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 MIR421-201ENST00000365696 85 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 Y_RNA.472-201ENST00000384322 102 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 RNA5SP18-201ENST00000390935 121 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 HNRNPCP2-201ENST00000399515 881 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 NUS1P4-201ENST00000401550 585 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 HMGN1P14-201ENST00000412459 517 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 EIF4A1P13-201ENST00000415667 230 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 MTCO2P34-201ENST00000421994 607 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AL049610.1-201ENST00000423374 372 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 ELOBP4-201ENST00000423418 296 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 RBMY2JP-201ENST00000425544 1059 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 CENPIP1-201ENST00000425713 902 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 DDX11L10-201ENST00000430178 571 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 CDY14P-201ENST00000431260 1014 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AL365220.1-201ENST00000432923 399 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC087499.3-202ENST00000441215 1173 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC068135.1-201ENST00000446164 246 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 CDY23P-201ENST00000451661 1014 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC234781.3-201ENST00000452540 973 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 RN7SL751P-201ENST00000473281 284 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 RN7SL332P-201ENST00000482163 254 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 HMGB1P36-201ENST00000487709 576 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC139713.1-202ENST00000512366 460 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AL139174.1-201ENST00000531489 886 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AP000619.1-201ENST00000540293 1000 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC004217.3-201ENST00000551552 878 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AL121579.1-201ENST00000555129 305 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC092325.1-201ENST00000566449 554 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 MIR4642-201ENST00000583943 82 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC090616.2-202ENST00000584248 222 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms