Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SNX18P8-201ENST00000455120 874 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 RN7SL241P-201ENST00000482973 236 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 MYADML-203ENST00000491596 951 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 RPL7AP2-201ENST00000496515 740 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 BNIP3P41-201ENST00000503774 571 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 HMGB1P47-201ENST00000511281 589 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 HMGB1P46-201ENST00000520062 610 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 OR4N3P-201ENST00000559395 818 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 ZNF771-203ENST00000564550 1187 ntTSL 5 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC021483.2-201ENST00000567415 758 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 U73023.1-201ENST00000603134 700 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC128687.1-201ENST00000605304 619 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 MIR6726-201ENST00000613751 61 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC116165.3-201ENST00000614524 400 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC243830.3-201ENST00000616810 376 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC245033.3-201ENST00000617986 224 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AL356321.1-201ENST00000621360 228 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC239859.6-201ENST00000622095 213 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC135068.4-201ENST00000622949 925 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC022819.1-201ENST00000563495 3910 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 ZNF812P-201ENST00000457674 1694 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 MFSD8-256ENST00000641949 1640 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 FO082842.1-201ENST00000423552 1370 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 MTCO1P6-201ENST00000481192 1384 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 IL26-201ENST00000229134 1075 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 TAS2R5-201ENST00000247883 1151 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 RNU6-181P-201ENST00000363225 107 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 RN7SKP208-201ENST00000365474 361 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 USP9YP6-201ENST00000413550 854 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 ZDHHC20P2-201ENST00000424108 429 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 AL136231.1-201ENST00000429407 730 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 OR3B1P-201ENST00000437536 893 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 PHBP9-201ENST00000453578 825 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 USP9YP34-201ENST00000453983 808 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 AC107015.1-201ENST00000466902 747 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 RN7SKP5-201ENST00000517045 272 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 NDUFS5P6-201ENST00000529136 295 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 OR6C7P-201ENST00000547875 934 ntBASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC8.15□□□□□ -1.1
FOXR1Q6PIV2 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms