Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ANXA2P2-201ENST00000435128 1020 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.42□□□□□ -1.38
NR1H2P55055 AL355355.1-201ENST00000442900 793 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 RPL31P20-201ENST00000449593 360 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 RBMY2EP-202ENST00000456360 940 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 AP005202.1-201ENST00000489915 867 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.42□□□□□ -1.38
NR1H2P55055 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.42□□□□□ -1.38
NR1H2P55055 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.42□□□□□ -1.38
NR1H2P55055 AC008868.1-201ENST00000509786 737 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 MTND2P31-201ENST00000512602 616 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 IGKV2-19-201ENST00000518132 283 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 AC104997.1-201ENST00000519761 717 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 AC087272.1-201ENST00000523624 533 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 PDCL3P1-201ENST00000534575 734 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.42□□□□□ -1.38
NR1H2P55055 HNRNPCP1-201ENST00000556181 766 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.42□□□□□ -1.38
NR1H2P55055 AC126323.4-201ENST00000566935 234 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.42□□□□□ -1.38
NR1H2P55055 AC096708.2-201ENST00000577676 512 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.42□□□□□ -1.38
NR1H2P55055 MIR3908-201ENST00000579798 126 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.42□□□□□ -1.38
NR1H2P55055 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.42□□□□□ -1.38
NR1H2P55055 SIGLEC31P-201ENST00000594237 551 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.42□□□□□ -1.38
NR1H2P55055 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.42□□□□□ -1.38
NR1H2P55055 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.42□□□□□ -1.38
NR1H2P55055 AL137246.2-201ENST00000613439 662 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.42□□□□□ -1.38
NR1H2P55055 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.42□□□□□ -1.38
NR1H2P55055 AP001153.1-201ENST00000641024 338 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 AC119674.1-220ENST00000641502 1048 ntBASIC6.42□□□□□ -1.38
NR1H2P55055 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
NR1H2P55055 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NR1H2P55055 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NR1H2P55055 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NR1H2P55055 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NR1H2P55055 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NR1H2P55055 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
NR1H2P55055 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.41□□□□□ -1.38
NR1H2P55055 AC006116.1-201ENST00000587908 2171 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 SAMMSON-203ENST00000641005 2168 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
NR1H2P55055 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 FAM32BP-201ENST00000344033 333 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NR1H2P55055 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 RNU6-1055P-201ENST00000391085 107 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 CXADRP1-201ENST00000398098 1095 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 MRPL32P1-201ENST00000406301 247 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 RN7SKP225-201ENST00000410405 352 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 AC096537.2-201ENST00000413707 714 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 MICG-208ENST00000416822 132 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 OR7E117P-201ENST00000422682 1112 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.41□□□□□ -1.38
NR1H2P55055 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC6.41□□□□□ -1.38
NR1H2P55055 LDHAP2-201ENST00000437325 985 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 BTBD7P2-201ENST00000441962 620 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.41□□□□□ -1.38
NR1H2P55055 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.41□□□□□ -1.38
NR1H2P55055 YRDCP3-201ENST00000456507 480 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.41□□□□□ -1.38
NR1H2P55055 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.41□□□□□ -1.38
NR1H2P55055 RPSAP24-201ENST00000461543 873 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.41□□□□□ -1.38
NR1H2P55055 SNORA58-201ENST00000505219 137 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.41□□□□□ -1.38
NR1H2P55055 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.41□□□□□ -1.38
NR1H2P55055 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.41□□□□□ -1.38
NR1H2P55055 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.41□□□□□ -1.38
NR1H2P55055 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.41□□□□□ -1.38
NR1H2P55055 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.41□□□□□ -1.38
NR1H2P55055 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.41□□□□□ -1.38
NR1H2P55055 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.41□□□□□ -1.38
NR1H2P55055 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.41□□□□□ -1.38
NR1H2P55055 CXADRP3-202ENST00000617265 1100 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 U1.34-201ENST00000618578 162 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 AC091059.2-201ENST00000623355 614 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.41□□□□□ -1.38
NR1H2P55055 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
NR1H2P55055 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.41□□□□□ -1.38
NR1H2P55055 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.41□□□□□ -1.38
NR1H2P55055 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
NR1H2P55055 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 AC125232.1-201ENST00000452554 1408 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms